Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02453 and RBAM_014590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:11
# Commandline: needle
# -asequence dna-align/BSNT_02453.1.9828.seq
# -bsequence dna-align/RBAM_014590___ylaC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02453-RBAM_014590___ylaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02453-RBAM_014590___ylaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02453
# 2: RBAM_014590___ylaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 536
# Identity: 227/536 (42.4%)
# Similarity: 227/536 (42.4%)
# Gaps: 238/536 (44.4%)
# Score: 713.0
#
#
#=======================================
BSNT_02453 0 -------------------------------------------------- 0
RBAM_014590__ 1 ATGAAAAACAAGATGTCAATTGAACAGCTGTATCGTGAACATTATCAAGA 50
BSNT_02453 0 -------------------------------------------------- 0
RBAM_014590__ 51 TATTATGTATTACCTTTACAGACGCACACATCATGCTGAGACCGCTAAAG 100
BSNT_02453 0 -------------------------------------------------- 0
RBAM_014590__ 101 ACCTCGCTCAGGATACATTTATGAAAGCATTTAACGGGCTTGATTCGTTT 150
BSNT_02453 0 -------------------------------------------------- 0
RBAM_014590__ 151 AAGGGCCATTCGTCTATCAGAACGTGGCTCTATGCAATTGCCCATCATAC 200
BSNT_02453 1 ---------TTGGTACCGAAGGGAT-GTCAATACCAATTTACTGAAATCA 40
|||||||.||.|.||| |..||||.||||||.|.||.||||
RBAM_014590__ 201 CTTCATCAATTGGTACAGACGTGATAGAAAATATCAATTTTCAGATATCA 250
BSNT_02453 41 GCAAAAATGAAGGG-TTAACGCAAACAACTTATGACCAGCCTGAACAGTA 89
.|...||||||||| ||.| |||||||||.|||||.|.|||.||.||.||
RBAM_014590__ 251 CCCTGAATGAAGGGCTTCA-GCAAACAACATATGAACTGCCGGAGCATTA 299
BSNT_02453 90 TCTGTCACGGACGGTGA-----AAAGCGAAACACTG---CGGCAG---GA 128
..|..|.|||||.|..| ||.||| ||| .||||| .|
RBAM_014590__ 300 CGTCGCCCGGACAGACACTCAGAATGCG-----CTGACCGGGCAGATTCA 344
BSNT_02453 129 GCTCCTGAAGTTAAAAGATCAGCATCAATCCGTTTTGATTTTAAGAGAAT 178
||..||||| ||..|||||| ||..|||||||.||||||||.||||
RBAM_014590__ 345 GCGTCTGAA---AAGCGATCAG---CAGACCGTTTTAATTTTAAGGGAAT 388
BSNT_02453 179 TCCAAGAGCTTTCTTATGAAGAAATCGCTGAGATATTAGGA-TGGAGTCT 227
|.||||||||.|||||.|||||.||.|||||..| ||.||| ||||||||
RBAM_014590__ 389 TTCAAGAGCTGTCTTACGAAGAGATTGCTGATGT-TTTGGACTGGAGTCT 437
BSNT_02453 228 TTCTAAGGTGAAAACCACATTGCACCGGGCTAGATTAGAGCTAAAGAAAA 277
|||.||||||||.|.|||..||.||.||||.|||.|..||||.||..|..
RBAM_014590__ 438 TTCGAAGGTGAAGAGCACCCTGTACAGGGCGAGAATGCAGCTGAAACAGC 487
BSNT_02453 278 ACATGACGAAAAGTAGAGAGGA-GGAGCGGATATGA 312
||.||.||.|||..||..|||| ||| |.|||||||
RBAM_014590__ 488 ACTTGGCGGAAAAAAGGAAGGACGGA-CAGATATGA 522
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