Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02451 and RBAM_014580

See DNA alignment / Visit BSNT_02451 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:11
# Commandline: needle
#    -asequence pep-align/BSNT_02451___ylaB.1.9828.seq
#    -bsequence pep-align/RBAM_014580___ylaB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02451___ylaB-RBAM_014580___ylaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02451___ylaB-RBAM_014580___ylaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02451___ylaB
# 2: RBAM_014580___ylaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      47/89 (52.8%)
# Similarity:    63/89 (70.8%)
# Gaps:           0/89 ( 0.0%)
# Score: 243.0
# 
#
#=======================================

BSNT_02451___      1 MNHKEKESVFVDLYDLYKEGELEDESMEWMKQHESLFQKNAEDLKSKTCL     50
                     ||:|||::||.||||||||||||..:::|||:||.||...||:.|.:...
RBAM_014580__      1 MNNKEKKAVFFDLYDLYKEGELEGGTLQWMKEHEHLFGAEAENRKGQYEH     50

BSNT_02451___     51 KRSPGAEEESQIRYMKVYLSSMYICFILLAIWMTVWFYF     89
                     ..:..:.:..||:|||.....:|..||:|:|||||||||
RBAM_014580__     51 GLNAPSGDIRQIKYMKCLTYGLYGFFIVLSIWMTVWFYF     89


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