Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02451 and RBAM_014580

See Amino acid alignment / Visit BSNT_02451 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:11
# Commandline: needle
#    -asequence dna-align/BSNT_02451___ylaB.1.9828.seq
#    -bsequence dna-align/RBAM_014580___ylaB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02451___ylaB-RBAM_014580___ylaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02451___ylaB-RBAM_014580___ylaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02451___ylaB
# 2: RBAM_014580___ylaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     182/305 (59.7%)
# Similarity:   182/305 (59.7%)
# Gaps:          70/305 (23.0%)
# Score: 511.0
# 
#
#=======================================

BSNT_02451___      1 ATGAATCATAAAGAAAAAGAATCTGTTTTTGTAGACTTATACGACCTGTA     50
                     |||||..|||||||||||.|..||||.||..|.||.|||||||||||.||
RBAM_014580__      1 ATGAACAATAAAGAAAAAAAGGCTGTCTTCTTCGATTTATACGACCTATA     50

BSNT_02451___     51 TAAAGAAGGAGAGCTAGAGGATGAATCAATGG-----------AATGGAT     89
                     |||.||.||.||.||      ||||     ||           |.|||||
RBAM_014580__     51 TAAGGAGGGGGAACT------TGAA-----GGCGGCACGCTCCAGTGGAT     89

BSNT_02451___     90 GAAACAGCATGA--ATCCCTATTTCAAAAGA----ATGCGGAAGACTTAA    133
                     ||||.|.|||||  ||  .||||    ..||    |.||||||.||..||
RBAM_014580__     90 GAAAGAACATGAGCAT--TTATT----CGGAGCTGAGGCGGAAAACAGAA    133

BSNT_02451___    134 A----GAGTA-AAACTTG--TTTAAAGAGAAGTCCCGGTGCTGAAGAAGA    176
                     |    .|||| .|||.||  ||.||.|.|..||||          |..||
RBAM_014580__    134 AAGGGCAGTATGAACATGGTTTGAATGCGCCGTCC----------GGCGA    173

BSNT_02451___    177 AA---GCCAAATCAGATATATGAAAGTATACCTGTCTTCCATGTATATCT    223
                     .|   ||||.||.|.|||.|||||   ||.||||.|.|  |||.||   |
RBAM_014580__    174 TATCCGCCAGATTAAATACATGAA---ATGCCTGACGT--ATGGAT---T    215

BSNT_02451___    224 GT--------TTCATTTTATTGGCCATTTGGATGACGGTGTGGTTTTACT    265
                     ||        ||||||.|..|..|.||.||||||||.|||||||||||.|
RBAM_014580__    216 GTACGGATTCTTCATTGTGCTCTCAATCTGGATGACAGTGTGGTTTTATT    265

BSNT_02451___    266 TTTAA    270
                     |||||
RBAM_014580__    266 TTTAA    270


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