Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02450 and RBAM_014560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:11
# Commandline: needle
# -asequence pep-align/BSNT_02450___ylaA.1.9828.seq
# -bsequence pep-align/RBAM_014560___ylaA1.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02450___ylaA-RBAM_014560___ylaA1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02450___ylaA-RBAM_014560___ylaA1.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02450___ylaA
# 2: RBAM_014560___ylaA1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 647
# Identity: 192/647 (29.7%)
# Similarity: 267/647 (41.3%)
# Gaps: 295/647 (45.6%)
# Score: 1045.0
#
#
#=======================================
BSNT_02450___ 1 -MELFSHYVLHFERYFILSRQSTLLIQWSIVVLAGLYLLVHHPKINLQRT 49
.|:|||::.||:|||||||||.|:||||.|.||.||.|..||||:.:|.
RBAM_014560__ 1 MSEIFSHFIQHFDRYFILSRQSVLIIQWSAVCLAVLYALTFHPKISRERV 50
BSNT_02450___ 50 MFLAGVMLRIVLLAGVSVELIHQVQSTNFTSAYLREDGKELLPLLHFLLY 99
.|.:|::||.|||||::|||:||||||:|::.||..:.:||||::|.|:|
RBAM_014560__ 51 WFYSGILLRAVLLAGITVELVHQVQSTHFSAHYLISEERELLPIVHLLMY 100
BSNT_02450___ 100 GYVLLTAFHYMLMPRDHGGKGKFYTFDLAVVSLPIVQMIFSFFTYWKENP 149
|||||||||||||||:..|||.||||||.||:||::|:|||||.:|..:|
RBAM_014560__ 101 GYVLLTAFHYMLMPREQRGKGMFYTFDLTVVTLPVIQLIFSFFAFWNISP 150
BSNT_02450___ 150 D---GVEPVAFV-FLFFIITLSIVLNVVFFKLYWRTNKILLGLFYTLIIG 195
| |.:.|:.: |:..::.|.|.:||:|||:||:...:.:|:||..:||
RBAM_014560__ 151 DAMAGEDIVSMLCFITVVLLLLISMNVLFFKMYWKPRPVFIGVFYAGVIG 200
BSNT_02450___ 196 LLVLLLAPYPNQISKDYGAVMPYTIYLAMAGFLMSYHLFQKSGKVYVRVN 245
|||.:||.....::||||.::|:|:||.||||||::|||.:|.::..|..
RBAM_014560__ 201 LLVWVLAAPSAGVTKDYGRLLPFTVYLTMAGFLMTHHLFHRSDRIRQRTK 250
BSNT_02450___ 246 KWVTMAVMVFFVLLLNPIYNIGTAAFAVSKPINVHDSFNYVGEHISSEKA 295
.::..|....|::.|||:||.|.||||||||: ..|:...||.||:|::|
RBAM_014560__ 251 NFLAGATAAGFIVFLNPVYNAGDAAFAVSKPM-AEDTVEDVGGHITSDQA 299
BSNT_02450___ 296 EQILKSFFPTDETLYLHDTNMDVHYFYSFESKSYKAEVDEVSQLIRNYEY 345
|:||.||||.:..:||.:||.|:||||.|::|.|:|||||||:||.||:|
RBAM_014560__ 300 ERILTSFFPAENPIYLTETNQDLHYFYRFKTKDYEAEVDEVSRLITNYQY 349
BSNT_02450___ 346 LQKAHGKKLTNQEYKRKSIAFLERHGRVLHKDHIETKVSQEDGQTVVRIY 395
|:......
RBAM_014560__ 350 LKNRKAAL------------------------------------------ 357
BSNT_02450___ 396 LKNQLHKKDHADDGAVFYWEKETLMGFSEDPSIYQLDSLLHVHITEQNIH 445
RBAM_014560__ 357 -------------------------------------------------- 357
BSNT_02450___ 446 DKVEQMFTALNISKQPYQITDIESDSLLGSMVRVETKDGIVLEFDGESGS 495
RBAM_014560__ 357 -------------------------------------------------- 357
BSNT_02450___ 496 LHSLSIPMKKEISLTNSRLQRQVLTVFDADVSEMKKKSSQSDMVMYTDSS 545
RBAM_014560__ 357 -------------------------------------------------- 357
BSNT_02450___ 546 KTYEFFEDQGQLNVYVYSDTPNQSFPYTYRNGTLAYEKVASLYQDVIYKK 595
RBAM_014560__ 357 -------------------------------------------------- 357
BSNT_02450___ 596 RMRPIIVQREDERHYAWLIIIQPFGSNRHDAYVVDGETQEVKSLYES 642
RBAM_014560__ 357 ----------------------------------------------- 357
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