Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02443 and RBAM_014540

See DNA alignment / Visit BSNT_02443 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:10
# Commandline: needle
#    -asequence pep-align/BSNT_02443___ykzC.1.9828.seq
#    -bsequence pep-align/RBAM_014540___ykzC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02443___ykzC-RBAM_014540___ykzC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02443___ykzC-RBAM_014540___ykzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02443___ykzC
# 2: RBAM_014540___ykzC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 155
# Identity:      95/155 (61.3%)
# Similarity:   123/155 (79.4%)
# Gaps:           5/155 ( 3.2%)
# Score: 554.0
# 
#
#=======================================

BSNT_02443___      1 MLGSRPFEQDDLSLLEKLAEAHPVWKEEEFGDKDAQDYIISYSMYNGVWL     50
                     ||..|.||::||..||:||.||||||.||||.|:|.:::::||||||.||
RBAM_014540__      1 MLTGRDFEEEDLGFLEQLAAAHPVWKNEEFGTKNAAEFMLAYSMYNGTWL     50

BSNT_02443___     51 VWEKDGLPVAVSYHLEWSPSNGKPWLGTVLIDPAEEKKGHAKMIIEQISK    100
                     |||.||.|.|||:||||:|||||||||||.:.|..::||..:.:||:|:.
RBAM_014540__     51 VWEIDGAPAAVSFHLEWAPSNGKPWLGTVAVAPEAKEKGIGRAVIEEIAG    100

BSNT_02443___    101 LLRAKHKAMFAGVPIERSEWILFLSQCGFEQLKTEKDEKGKSFMILVKPL    150
                     .||.:|||||:.||::|.||:||||||||||||.|||::.|::||:||||
RBAM_014540__    101 RLRGEHKAMFSAVPLDRQEWVLFLSQCGFEQLKLEKDDREKTYMIMVKPL    150

BSNT_02443___    151 AEAAV    155
                          
RBAM_014540__    150 -----    150


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