Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02435 and RBAM_014480

See DNA alignment / Visit BSNT_02435 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:10
# Commandline: needle
#    -asequence pep-align/BSNT_02435.1.9828.seq
#    -bsequence pep-align/RBAM_014480.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02435-RBAM_014480.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02435-RBAM_014480.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02435
# 2: RBAM_014480
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 39
# Identity:      36/39 (92.3%)
# Similarity:    38/39 (97.4%)
# Gaps:           0/39 ( 0.0%)
# Score: 213.0
# 
#
#=======================================

BSNT_02435         1 MGTIVCQDCNEAIHYFEDEKVTTLYGTCCGQCQCPVDEE     39
                     ||||||||||||||||||||||||||||||||||.::||
RBAM_014480        1 MGTIVCQDCNEAIHYFEDEKVTTLYGTCCGQCQCHLEEE     39


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.