Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02435 and RBAM_014480

See Amino acid alignment / Visit BSNT_02435 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:10
# Commandline: needle
#    -asequence dna-align/BSNT_02435.1.9828.seq
#    -bsequence dna-align/RBAM_014480.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02435-RBAM_014480.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02435-RBAM_014480.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02435
# 2: RBAM_014480
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:     106/120 (88.3%)
# Similarity:   106/120 (88.3%)
# Gaps:           0/120 ( 0.0%)
# Score: 474.0
# 
#
#=======================================

BSNT_02435         1 ATGGGTACGATTGTTTGCCAAGATTGCAACGAAGCCATTCATTACTTTGA     50
                     ||||||||.||||||||||||||.||.||||||||.||||||||||||||
RBAM_014480        1 ATGGGTACAATTGTTTGCCAAGACTGTAACGAAGCGATTCATTACTTTGA     50

BSNT_02435        51 AGATGAGAAAGTGACAACATTATACGGAACATGCTGCGGACAATGTCAAT    100
                     .||||||||.||.||.||.||||||||||||||||||||||||||.||.|
RBAM_014480       51 GGATGAGAAGGTCACGACGTTATACGGAACATGCTGCGGACAATGCCAGT    100

BSNT_02435       101 GTCCTGTTGATGAAGAGTAA    120
                     |||.|.||||.|||||||||
RBAM_014480      101 GTCATCTTGAAGAAGAGTAA    120


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.