Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02428 and RBAM_014310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:09
# Commandline: needle
# -asequence pep-align/BSNT_02428.1.9828.seq
# -bsequence pep-align/RBAM_014310___ykyA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02428-RBAM_014310___ykyA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02428-RBAM_014310___ykyA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02428
# 2: RBAM_014310___ykyA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 220
# Identity: 63/220 (28.6%)
# Similarity: 92/220 (41.8%)
# Gaps: 85/220 (38.6%)
# Score: 313.0
#
#
#=======================================
BSNT_02428 0 -------------------------------------------------- 0
RBAM_014310__ 1 MIQKKVLAGIGALGAASMLLAGCGGKDPAESLHDSMEKAVQAEKPFQKEQ 50
BSNT_02428 1 ---------------------------MLLYLIKALENVSKREEHLKLEN 23
::....:||.|.::|::|||.|.
RBAM_014310__ 51 KTLEKLEKKEHKLYDSAVKLNMDDYQKIVTLSDQALSNANQRKKHLKAEK 100
BSNT_02428 24 DSMKKSETEFEEAKTSAEHIKEKDIKEKADAAANHMEKRYTSYGTMYKEY 73
||:..|:..||.||.:::.||:|.:||||..|...|||||.||..:||:|
RBAM_014310__ 101 DSIDDSKKAFESAKKTSQEIKDKKVKEKAGHAVALMEKRYASYDLLYKKY 150
BSNT_02428 74 KKALELNKKLYMQLKDKDLTRDDLDQQIDKVNASYEKILKYSGEFNEQTE 123
:||:.|:|.||..:|||.||...|::||.|||:.|||:.|.:.|||:.|:
RBAM_014310__ 151 EKAISLDKDLYKLIKDKKLTLAQLEEQISKVNSVYEKVHKQADEFNQFTK 200
BSNT_02428 124 KYNKAREDLYDAAGYRVKKS 143
.|||.:|.|:..
RBAM_014310__ 201 DYNKEKELLFCK-------- 212
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