Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_02423 and RBAM_014300

See DNA alignment / Visit BSNT_02423 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:09
# Commandline: needle
#    -asequence pep-align/BSNT_02423___def.1.9828.seq
#    -bsequence pep-align/RBAM_014300___def.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02423___def-RBAM_014300___def.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02423___def-RBAM_014300___def.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02423___def
# 2: RBAM_014300___def
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 184
# Identity:     167/184 (90.8%)
# Similarity:   172/184 (93.5%)
# Gaps:           0/184 ( 0.0%)
# Score: 867.0
# 
#
#=======================================

BSNT_02423___      1 MITMENIVRDGHPALRETAEPVELPPTDAEKQQLADMIEFVKNSQNPELA     50
                     |||||||||||||||||.||.|:||.:|.|||.|||||||||||||||||
RBAM_014300__      1 MITMENIVRDGHPALREIAEEVQLPASDEEKQHLADMIEFVKNSQNPELA     50

BSNT_02423___     51 EKYKLRPGVGLAAPQINIKKRMIAVHAEDASGKLYSYALFNPKIVSHSVE    100
                     |||||||||||||||.::||||||||||||.|.|||||||||||||||||
RBAM_014300__     51 EKYKLRPGVGLAAPQTDVKKRMIAVHAEDAKGTLYSYALFNPKIVSHSVE    100

BSNT_02423___    101 KSYLTSGEGCLSVDEAIPGYVPRYARIRVKGTTLEGENIDIRLKGFPAIV    150
                     |||||||||||||||.||||||||||||||..|||||.||||||||||||
RBAM_014300__    101 KSYLTSGEGCLSVDEPIPGYVPRYARIRVKAVTLEGEQIDIRLKGFPAIV    150

BSNT_02423___    151 FQHEIDHLNGVMFYDHIDKENPFKEPENAIAIER    184
                     ||||||||||||||||||||||||||||||||:|
RBAM_014300__    151 FQHEIDHLNGVMFYDHIDKENPFKEPENAIAIDR    184


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.