Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02423 and RBAM_014300

See Amino acid alignment / Visit BSNT_02423 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:09
# Commandline: needle
#    -asequence dna-align/BSNT_02423___def.1.9828.seq
#    -bsequence dna-align/RBAM_014300___def.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02423___def-RBAM_014300___def.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02423___def-RBAM_014300___def.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02423___def
# 2: RBAM_014300___def
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 559
# Identity:     448/559 (80.1%)
# Similarity:   448/559 (80.1%)
# Gaps:           8/559 ( 1.4%)
# Score: 1805.0
# 
#
#=======================================

BSNT_02423___      1 TTGATTACTATGGAAAACATCGTACGTGACGGCCATCCAGCCCTCAGAGA     50
                     |||||||||||||||||.||.|||||.|||||.|||||.||.||||||||
RBAM_014300__      1 TTGATTACTATGGAAAATATTGTACGCGACGGACATCCCGCGCTCAGAGA     50

BSNT_02423___     51 GACTGCCGAACCTGTTGAGCTGCCTCCAACTGATGCAGAAAAACAGCAGC    100
                     ||..||.|||...|||.||||.||..|..||||.|.||||||||||||.|
RBAM_014300__     51 GATCGCTGAAGAGGTTCAGCTTCCCGCTTCTGACGAAGAAAAACAGCATC    100

BSNT_02423___    101 TGGCCGACATGATCGAATTTGTTAAAAACAGCCAAAATCCGGAATTAGCC    150
                     |.||.||.|||||.||.|||||.|||||||||||||||||.|||||||||
RBAM_014300__    101 TTGCTGATATGATTGAGTTTGTGAAAAACAGCCAAAATCCTGAATTAGCC    150

BSNT_02423___    151 GAAAAATACAAGCTGCGCCCTGGCGTAGGACTCGCAGCTCCTCAAATTAA    200
                     ||.|||||||||||.||.||.|||||.||.||.||.|||||.||||...|
RBAM_014300__    151 GAGAAATACAAGCTTCGTCCGGGCGTCGGTCTTGCCGCTCCCCAAACAGA    200

BSNT_02423___    201 TATCAAAAAACGAATGATCGCCGTTCATGCGGAAGATGCTTCCGGTAAAT    250
                     ..|.||||||||.|||||||||||.|||||.||||||||....||.|..|
RBAM_014300__    201 CGTAAAAAAACGGATGATCGCCGTCCATGCAGAAGATGCGAAAGGCACTT    250

BSNT_02423___    251 TATACAGCTATGCTCTGTTTAATCCTAAGATCGTCAGCCATTCAGTTGAA    300
                     ||||||||||||||||.|||||.|||||||||||||||||.|||||.|||
RBAM_014300__    251 TATACAGCTATGCTCTTTTTAACCCTAAGATCGTCAGCCACTCAGTGGAA    300

BSNT_02423___    301 AAAAGCTACTTAACAAGCGGCGAGGGCTGCCTCTCTGTGGATGAAGCGAT    350
                     |||||||||||.||.|||||.||.||||||||.||.||.||.|||.|.||
RBAM_014300__    301 AAAAGCTACTTGACGAGCGGAGAAGGCTGCCTGTCGGTAGACGAACCCAT    350

BSNT_02423___    351 TCCCGGTTATGTTCCCCGCTATGCTCGCATCAGAGTAAAAG----GAACA    396
                     ||||||.|||||.||.|||||.||.||||||.|.|||||.|    |    
RBAM_014300__    351 TCCCGGCTATGTGCCGCGCTACGCCCGCATCCGCGTAAAGGCGGTG----    396

BSNT_02423___    397 ACACTAGAAGGCGAAAATATTGATATTCGTTTAAAAGGATTTCCGGCTAT    446
                     ||.||.|||||.|||.|.|||||.||.||..|.|||||.||||||||.||
RBAM_014300__    397 ACGCTTGAAGGAGAACAGATTGACATCCGCCTCAAAGGTTTTCCGGCCAT    446

BSNT_02423___    447 TGTGTTTCAGCATGAGATCGATCATTTGAACGGCGTTATGTTCTATGATC    496
                     .|||||||||||.||.|||||||||.||||||||||.|||||.||.||.|
RBAM_014300__    447 CGTGTTTCAGCACGAAATCGATCATCTGAACGGCGTGATGTTTTACGACC    496

BSNT_02423___    497 ATATTGATAAGGAAAATCCTTTCAAAGAACCTGAAAATGCAATCGCAATT    546
                     ||||||||||.||||||||.|||||||||||||||||.||.||.||.|||
RBAM_014300__    497 ATATTGATAAAGAAAATCCGTTCAAAGAACCTGAAAACGCCATTGCCATT    546

BSNT_02423___    547 GAGCGCTAA    555
                     ||.||.|||
RBAM_014300__    547 GACCGTTAA    555


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