Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02418 and RBAM_014260

See DNA alignment / Visit BSNT_02418 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:08
# Commandline: needle
#    -asequence pep-align/BSNT_02418___adeC.1.9828.seq
#    -bsequence pep-align/RBAM_014260___adeC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02418___adeC-RBAM_014260___adeC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02418___adeC-RBAM_014260___adeC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02418___adeC
# 2: RBAM_014260___adeC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 577
# Identity:     459/577 (79.5%)
# Similarity:   507/577 (87.9%)
# Gaps:           0/577 ( 0.0%)
# Score: 2363.0
# 
#
#=======================================

BSNT_02418___      1 MNKEALVNRLNASAKRQKADIVIKNGKIMDVYNQEWIYEDIAITDGVIVG     50
                     ||||.|..||||||.|||||.||||||||||:|||||..|||||.|||||
RBAM_014260__      1 MNKETLAERLNASAGRQKADTVIKNGKIMDVFNQEWISADIAITGGVIVG     50

BSNT_02418___     51 LGEYEGENIIDAEGQMIVPGFIDGHVHIESSMVTPIEFAKAVLPHGVTTV    100
                     |||||||.:|||||||||||||||||||||||||||||||||||||||||
RBAM_014260__     51 LGEYEGEEVIDAEGQMIVPGFIDGHVHIESSMVTPIEFAKAVLPHGVTTV    100

BSNT_02418___    101 VTDPHEIANVSGEKGIVFMIEQARHTPLNIHFMLPSSVPAASFERSGAIL    150
                     :|||||||||||.|||.||||||:..||||.|||||.|||||||||||:|
RBAM_014260__    101 ITDPHEIANVSGAKGISFMIEQAKKAPLNIRFMLPSCVPAASFERSGAVL    150

BSNT_02418___    151 KAADLKPFYGEEEVLGLAEVMDYVSVQQAEEDMVQKLLDARVAGKRIDGH    200
                     ||.||||||.|:||||||||||||||.:.||||:||||||:..|||||||
RBAM_014260__    151 KAEDLKPFYQEKEVLGLAEVMDYVSVAEGEEDMLQKLLDAKRHGKRIDGH    200

BSNT_02418___    201 LAGLSTDLINIYRTAFVLNDHEVTSKEEALNRIRRGMYVMMREGSVAKNT    250
                     |||||:|:|||||||.|.||||||:|||||:|||||||||:|||||||||
RBAM_014260__    201 LAGLSSDIINIYRTAMVSNDHEVTTKEEALDRIRRGMYVMLREGSVAKNT    250

BSNT_02418___    251 LNVLPAVNEKNARRFFFCTDDKHVDDLLSEGSVNHQVKMAIQAGLDPFLA    300
                     |||||||||||||||||||||||||||||||||||||||||:||||||||
RBAM_014260__    251 LNVLPAVNEKNARRFFFCTDDKHVDDLLSEGSVNHQVKMAIKAGLDPFLA    300

BSNT_02418___    301 YQLGSLNAAECYGLDTKGAIAPGYDADLLFVSDLENVTVTMTMVKGQTVA    350
                     |||.||||||||||:||||:|||:||||||:||:....||.|||.|:|||
RBAM_014260__    301 YQLASLNAAECYGLETKGAVAPGFDADLLFISDVREAVVTKTMVAGRTVA    350

BSNT_02418___    351 EDSKAVYQDHASTAAPDQALLDSVKLAAPLNKQDFHMPIDSEQQINVIQI    400
                     |:.:.||:..|.:.:|||||||:|:|.|||.:.|||:||...:::|||::
RBAM_014260__    351 ENGRTVYEQSAGSYSPDQALLDTVRLKAPLTESDFHIPIQEGKKMNVIEM    400

BSNT_02418___    401 IPNQLETRLVQVPAPDAREFEPDTEFDLLKIAVVERHKGLKETGLGVVKG    450
                     |||.||||..:||||.|..|.||||.|||||||.|||.|.|..|||:|:|
RBAM_014260__    401 IPNHLETRKKEVPAPSADAFCPDTENDLLKIAVAERHSGEKMIGLGIVQG    450

BSNT_02418___    451 FGFKSGAIATTISHDSHNIIAVGTNDEDIAAAVNKLQEIGGGLTIIKNGE    500
                     ||.|.|||||||||||||||||||||.|:|.|:|:|::.|||||.:||||
RBAM_014260__    451 FGLKEGAIATTISHDSHNIIAVGTNDADLAKAINRLRDTGGGLTAVKNGE    500

BSNT_02418___    501 ELHSVPLPIAGLLSDQSAEQVNQSLLTLHDKLPLIGFTGGFNPFLTLSFL    550
                     .||||||||||||||:|||.||.||..||:||||:||||.||||||||||
RBAM_014260__    501 LLHSVPLPIAGLLSDKSAEWVNDSLGVLHEKLPLLGFTGDFNPFLTLSFL    550

BSNT_02418___    551 ALPVIPDIKMTTTGLFDVKSFQHISLQ    577
                     |||||||||||..||||||:||||.||
RBAM_014260__    551 ALPVIPDIKMTAAGLFDVKAFQHIPLQ    577


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.