Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02418 and RBAM_014260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:08
# Commandline: needle
# -asequence dna-align/BSNT_02418___adeC.1.9828.seq
# -bsequence dna-align/RBAM_014260___adeC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02418___adeC-RBAM_014260___adeC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02418___adeC-RBAM_014260___adeC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02418___adeC
# 2: RBAM_014260___adeC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1782
# Identity: 1285/1782 (72.1%)
# Similarity: 1285/1782 (72.1%)
# Gaps: 96/1782 ( 5.4%)
# Score: 4431.0
#
#
#=======================================
BSNT_02418___ 1 TTGAATAAAGAAGCGCTAG-TCAATAGGCTGAATGCTTCAGCCAAAAGAC 49
|||||.||||||.|.||.| |.|| .||||||||||.||||||...||||
RBAM_014260__ 1 TTGAACAAAGAAACACTGGCTGAA-CGGCTGAATGCATCAGCCGGCAGAC 49
BSNT_02418___ 50 AAAAAGCTGATATCGTCATTAAAAACGGAAAAATCATGGACGTATATAAT 99
|||||||.||||.|||||||||||||||||||||||||||.||||.|||.
RBAM_014260__ 50 AAAAAGCCGATACCGTCATTAAAAACGGAAAAATCATGGATGTATTTAAC 99
BSNT_02418___ 100 CAAGAATGGATATATGAAGATATTGCGATTACAGATGGAGTTATTGTAGG 149
||.||||||||.|.||.||||||.||.|||||.|..|||||.||.||.||
RBAM_014260__ 100 CAGGAATGGATTTCTGCAGATATCGCCATTACGGGCGGAGTGATCGTCGG 149
BSNT_02418___ 150 CCTCGGTGAGTATGAAGGCGAAAATATCATTGATGCAGAGGGACAAATGA 199
.||.||.||.||||||||.|||.|..|||||||||||||.||.|||||||
RBAM_014260__ 150 GCTGGGCGAATATGAAGGGGAAGAAGTCATTGATGCAGAAGGTCAAATGA 199
BSNT_02418___ 200 TTGTTCCGGGTTTTATTGATGGACATGTACATATTGAGTCGTCAATGGTT 249
|.||||||||.||||||||.||||||||.|||||.|||||.||.||||||
RBAM_014260__ 200 TCGTTCCGGGCTTTATTGACGGACATGTTCATATCGAGTCCTCTATGGTT 249
BSNT_02418___ 250 ACACCGATTGAGTTCGCTAAAGCAGTGTTGCCTCATGGCGTGACGACGGT 299
||.||||||||.||.||||||||.||..|.||.||.||.|||||.||.||
RBAM_014260__ 250 ACTCCGATTGAATTTGCTAAAGCCGTCCTCCCACACGGAGTGACTACTGT 299
BSNT_02418___ 300 TGTTACAGATCCGCATGAAATCGCGAATGTGTCTGGTGAAAAAGGGATTG 349
..||||.|||||.||.|||||.|||||.||.||.||.|.||||||.|||.
RBAM_014260__ 300 CATTACTGATCCTCACGAAATTGCGAACGTTTCCGGAGCAAAAGGCATTT 349
BSNT_02418___ 350 TGTTTATGATTGAACAAGCTCGGCATA---CACCGCTGAATATCCATTTT 396
..||||||||.||.||.|| |.|.| |.||||||||.||||.|||.
RBAM_014260__ 350 CTTTTATGATAGAGCAGGC---GAAAAAGGCGCCGCTGAACATCCGTTTC 396
BSNT_02418___ 397 ATGCTTCCTTCCAGTGTGCCTGCCGCAAGTTTTGAGCGATCAGGCGCAAT 446
||||||||||||.||||.||.|||||.||.|||||.||.|||||.||..|
RBAM_014260__ 397 ATGCTTCCTTCCTGTGTTCCCGCCGCTAGCTTTGAACGCTCAGGAGCCGT 446
BSNT_02418___ 447 TCTCAAAGCTGCCGATCTCAAGCCTTTTTAT--GGAGAAGAAGAAGTATT 494
..|.|||||.|..|||.|.|||||||||||| ||||| ||||.||..|
RBAM_014260__ 447 ATTAAAAGCCGAGGATTTAAAGCCTTTTTATCAGGAGA--AAGAGGTGCT 494
BSNT_02418___ 495 AGGGCTGGCTGAAGTTATGGATTATGTGTCGGTT-CAGCAGGCTGAAGAA 543
.||.||.||.|||||.||||||||||||||.||| |.|.||| ||||||.
RBAM_014260__ 495 CGGACTTGCGGAAGTAATGGATTATGTGTCTGTTGCGGAAGG-TGAAGAG 543
BSNT_02418___ 544 GACATGGTTCAGAAACTGCTCGATGCC---CGTGTGGCA-GGAAAAAGGA 589
||.|||.|||||||||||||.|||||| ||| || ||||||.|||
RBAM_014260__ 544 GATATGCTTCAGAAACTGCTTGATGCCAAGCGT----CACGGAAAACGGA 589
BSNT_02418___ 590 TAGACGGTCATTTAGCTGGTTTATCAACAGACCTCATTAACATTTACAGA 639
|.|||||.||||||||.||..|.||..||||..||||.||.||.||||||
RBAM_014260__ 590 TCGACGGGCATTTAGCCGGACTGTCTTCAGATATCATCAATATATACAGA 639
BSNT_02418___ 640 ACCGCCTTTGTCTTAAACGACCATGAAGTAACATCGAAGGAAGAAGCCCT 689
|||||..|.||.|.|||.||.||||||||.||..|.||.||||||||.||
RBAM_014260__ 640 ACCGCAATGGTGTCAAATGATCATGAAGTGACGACAAAAGAAGAAGCGCT 689
BSNT_02418___ 690 TAATCGTATCAGAAGAGGCATGTATGTCATGATGCGTGAAGGATCAGTCG 739
..|..|.||||||.|.||.||||||||||||.||||.||||||||.||.|
RBAM_014260__ 690 GGACAGAATCAGACGGGGAATGTATGTCATGCTGCGCGAAGGATCGGTGG 739
BSNT_02418___ 740 CCAAAAACACGCTCAATGTGCTTCCGGCGGTGAATGAAAAGAACGCACGC 789
|.|||||.||||||||||||||.|||||||||||||||||.|||||.||.
RBAM_014260__ 740 CAAAAAATACGCTCAATGTGCTGCCGGCGGTGAATGAAAAAAACGCGCGG 789
BSNT_02418___ 790 CGTTTCTTTTTTTGTACGGATGATAAGCATGTGGATGATTTATTGTCAGA 839
||.||.||.|||||.|||||||||||||||||.||||||.|..|.|||||
RBAM_014260__ 790 CGCTTTTTCTTTTGCACGGATGATAAGCATGTAGATGATCTGCTTTCAGA 839
BSNT_02418___ 840 GGGAAGTGTAAACCATCAGGTGAAAATGGCGATTCAAGCTGGACTTGATC 889
.||||||||.|||||.||.||.|||||||||||..|.||.||||||||||
RBAM_014260__ 840 AGGAAGTGTGAACCACCAAGTCAAAATGGCGATAAAGGCGGGACTTGATC 889
BSNT_02418___ 890 CGTTTTTAGCCTATCAATTAGGAAGCCTCAATGCGGCCGAATGCTACGGA 939
|.||..|.||.|||||..|.|..||..|.||||||||.||.||||||||.
RBAM_014260__ 890 CATTCCTTGCGTATCAGCTCGCCAGTTTAAATGCGGCTGAGTGCTACGGT 939
BSNT_02418___ 940 TTAGATACAAAGGGAGCGATTGCCCCGGGTTATGACGCTGATTTACTCTT 989
.|.||.|||||.||.|||.|.||.|||||||.||||||.|||.|.||.||
RBAM_014260__ 940 CTTGAAACAAAAGGGGCGGTAGCGCCGGGTTTTGACGCAGATCTGCTGTT 989
BSNT_02418___ 990 TGTATCTGATTT---GGAAAATGTCACTGTCACAATGACGATGGTAAAAG 1036
|.|.||.|||.| |||...|||| |||||.|.|||.|||||....|
RBAM_014260__ 990 TATTTCAGATGTACGGGAGGCTGTC---GTCACGAAGACCATGGTCGCCG 1036
BSNT_02418___ 1037 GGCAGACTGTTGCTGA----AGACAGCAAAGCGGTCTATCAGGATCA-TG 1081
|.|.|||.|||||.|| .||| ||| ||||.||| ||.|| |
RBAM_014260__ 1037 GCCGGACCGTTGCCGAGAACGGAC-GCA---CGGTTTAT---GAACAGT- 1078
BSNT_02418___ 1082 CTTCAACTGCAG---------CACCAGATCAGGCACTGCTTGATTCTGTT 1122
||||.| |.||.||.|||||.|||.|.|||.|.|
RBAM_014260__ 1079 ------CTGCCGGTTCCTATTCGCCGGACCAGGCGCTGTTGGATACAG-- 1120
BSNT_02418___ 1123 AAGCTTGCTGCT-------CCTCTTAACAAACAGGATTTTCATATGCCAA 1165
|||.||| ||.||.|...||..|||||||||||| |
RBAM_014260__ 1121 -----TGCGGCTGAAAGCGCCGCTGACTGAATCGGATTTTCATAT----A 1161
BSNT_02418___ 1166 TCGATTC-AGAG---CAGCAAATCAATGTCATTCAAATCATACCAAATCA 1211
.|||||| |||| .||.||||.|||||.||..||||.|||||.|||||
RBAM_014260__ 1162 CCGATTCAAGAGGGTAAGAAAATGAATGTAATCGAAATGATACCGAATCA 1211
BSNT_02418___ 1212 GCTTGAAACAAGATTAGTACAAGTTCCGGCTC---CTGATGCCCGCGAAT 1258
..|.||.||.|||..|..|.||||.||.||.| |||.|| .|||| |
RBAM_014260__ 1212 TTTGGAGACGAGAAAAAAAGAAGTGCCTGCACCGTCTGCTG-ACGCG--T 1258
BSNT_02418___ 1259 TTGAGCCTGACACTGAGTTTGATTTGTTAAAGATTGCAGTTGTCGAGCGG 1308
||...|||||.||.||...||||||.|||||.||.||.||.|..||||||
RBAM_014260__ 1259 TTTGTCCTGATACAGAAAATGATTTATTAAAAATCGCCGTCGCAGAGCGG 1308
BSNT_02418___ 1309 CATAAAGGATTGAAAGAA--ACCGGACTTGGTGTTGTGAAAGGTTTTGGA 1356
||.|..|| .||||.|| |..|||||.||..||||..||||.||.||.
RBAM_014260__ 1309 CACAGCGG--CGAAAAAATGATAGGACTCGGGATTGTACAAGGGTTCGGG 1356
BSNT_02418___ 1357 TTCAAGAG-CGGAGCGATTGCCACAACCATTTCACACGACTCCCATAATA 1405
|| ||.|| .||.||.||.||||||||||||||.|||||.||||||||||
RBAM_014260__ 1357 TT-AAAAGAAGGCGCCATCGCCACAACCATTTCTCACGATTCCCATAATA 1405
BSNT_02418___ 1406 TTATTGCTGTCGGAACGAATGATGAGGATATCGCGGCGGCAGTTAATAAG 1455
|.||.||.|||||.||.||.||||..|||.|.||....|||.|.||.|.|
RBAM_014260__ 1406 TCATCGCCGTCGGTACAAACGATGCCGATTTGGCAAAAGCAATCAACAGG 1455
BSNT_02418___ 1456 CTGCAGGAAATTGGCGGAGGATTAACGATTATAAAAAATGGGGAAGAGCT 1505
||.|..||.|..||.|||||||||||...|.|.|||||.||.|||..|||
RBAM_014260__ 1456 CTCCGTGACACCGGAGGAGGATTAACAGCTGTGAAAAACGGAGAATTGCT 1505
BSNT_02418___ 1506 CCATTCAGTACCGTTGCCGATTGCAGGGTTATTATCCGACCAATCTGCAG 1555
.||.||.||.|||.|.|||||.||.|||.|.||.||.||..|.||.||.|
RBAM_014260__ 1506 TCACTCCGTTCCGCTTCCGATCGCCGGGCTTTTGTCTGATAAGTCGGCGG 1555
BSNT_02418___ 1556 AGCAAGTGAATCAAAGCTTGCTGAC--GCTTCATGATAAATTGCCGTTAA 1603
|....||.|||.|.|||||| |.| |||||||||.||..|.||..|..
RBAM_014260__ 1556 AATGGGTCAATGACAGCTTG--GGCGTGCTTCATGAAAAGCTTCCTCTGC 1603
BSNT_02418___ 1604 TCGGTTTCACAGGCGGATTT-AATCCATTTTTGACATTGTCGTTTTTAGC 1652
||||.|||||.|| .||||| |||||.|||.|.|||||.|||||||||||
RBAM_014260__ 1604 TCGGATTCACCGG-TGATTTCAATCCGTTTCTCACATTATCGTTTTTAGC 1652
BSNT_02418___ 1653 TTTGCCTGTCATTCCTGATATTAAAATGACGACTACGGGATTATTCGATG 1702
..|.||.||.|||||.||||||||||||||..|..|.||..|.||.||||
RBAM_014260__ 1653 GCTTCCGGTGATTCCGGATATTAAAATGACAGCAGCCGGTCTGTTTGATG 1702
BSNT_02418___ 1703 TAAAATCATTTCAACACATATCACTGCAATAA 1734
|.|||.|.|||||.||.||..|.|||||||||
RBAM_014260__ 1703 TCAAAGCCTTTCAGCATATTCCGCTGCAATAA 1734
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