Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02415 and RBAM_014240

See DNA alignment / Visit BSNT_02415 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:08
# Commandline: needle
#    -asequence pep-align/BSNT_02415___ykqA.1.9828.seq
#    -bsequence pep-align/RBAM_014240___ykqA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02415___ykqA-RBAM_014240___ykqA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02415___ykqA-RBAM_014240___ykqA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02415___ykqA
# 2: RBAM_014240___ykqA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     161/279 (57.7%)
# Similarity:   204/279 (73.1%)
# Gaps:           6/279 ( 2.2%)
# Score: 847.5
# 
#
#=======================================

BSNT_02415___      1 MNSLLFVYGTLRKHEKNHHLLAQSACINEQARTKGSLFAA-KEVPTAVFN     49
                       .|||.||.|||.|:||.||..:.|:.|||...|.|:.. |..|.|.. 
RBAM_014240__      1 --MLLFAYGLLRKREENHELLKGAPCVCEQAAINGVLYETDKGQPAASL-     47

BSNT_02415___     50 DEDEGYIYGEVYEADELCIHKLDQFFQGYHKQTVFVETDVGIKIALIYFM     99
                      .:..::|||:||.|...|.|||.::..:.::.|.|.||.|.|.|..|.:
RBAM_014240__     48 -AETAFVYGELYETDHQMIRKLDAYYADFDRKEVAVTTDAGNKTAFAYVV     96

BSNT_02415___    100 NKDGCAGFTKISSGDWKEHQMISK-SKNPIYYFAYGSCMDNARFQKAGVD    148
                     ..|.||.|.:|.||||||::.:.: ..:|:||||||||||||||::||||
RBAM_014240__     97 KPDQCASFNRIKSGDWKEYRFMKREDDSPVYYFAYGSCMDNARFKQAGVD    146

BSNT_02415___    149 HYFQDPVGRAVLKGYTTRFTLKREDGSRADMLEDGGTTEGVLYRIPYSAL    198
                     |:|.:|||.||::||:|||||:|.||||||::||||.||||||::|:.|.
RBAM_014240__    147 HFFAEPVGGAVVEGYSTRFTLRRPDGSRADLVEDGGRTEGVLYKLPFEAA    196

BSNT_02415___    199 SYLYKREGVESLTYRPAFVDVEAGGRHYKDCLTFLVLQKEAEIAPPQHYQ    248
                     :||||||||::.||||||::|.||||.|:..||||||.|..|||||.|||
RBAM_014240__    197 TYLYKREGVDNHTYRPAFIEVCAGGRVYRGVLTFLVLDKAEEIAPPGHYQ    246

BSNT_02415___    249 IEIERGAELYLSPEFTEKLKRHMNSLPKG    277
                     .||||||:|||||.|:|||||:||||||.
RBAM_014240__    247 EEIERGADLYLSPAFSEKLKRYMNSLPKM    275


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