Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02405 and RBAM_014160

See DNA alignment / Visit BSNT_02405 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:07
# Commandline: needle
#    -asequence pep-align/BSNT_02405___ykoA.1.9828.seq
#    -bsequence pep-align/RBAM_014160___ykoA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02405___ykoA-RBAM_014160___ykoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02405___ykoA-RBAM_014160___ykoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02405___ykoA
# 2: RBAM_014160___ykoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      69/89 (77.5%)
# Similarity:    82/89 (92.1%)
# Gaps:           0/89 ( 0.0%)
# Score: 362.0
# 
#
#=======================================

BSNT_02405___      1 MRLLTLTEYCLLIFFTGFYLAVTGFTAKDIGLYIGIALIYIFSHIFSKRL     50
                     |:|||||||||:|||||.:||||||||:|||||:||||||.|||:||||:
RBAM_014160__      1 MKLLTLTEYCLMIFFTGIFLAVTGFTARDIGLYVGIALIYTFSHLFSKRM     50

BSNT_02405___     51 LEKRGKENKQVHLFFSVLAIIGSVFITVLCIALVASFSK     89
                     |||||||.:||:||||||||:|||..||:.||:.|||:|
RBAM_014160__     51 LEKRGKEKQQVNLFFSVLAIVGSVLATVMFIAVAASFAK     89


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