Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02400 and RBAM_014120

See DNA alignment / Visit BSNT_02400 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:07
# Commandline: needle
#    -asequence pep-align/BSNT_02400___fruR.1.9828.seq
#    -bsequence pep-align/RBAM_014120___fruR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02400___fruR-RBAM_014120___fruR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02400___fruR-RBAM_014120___fruR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02400___fruR
# 2: RBAM_014120___fruR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     219/251 (87.3%)
# Similarity:   236/251 (94.0%)
# Gaps:           0/251 ( 0.0%)
# Score: 1113.0
# 
#
#=======================================

BSNT_02400___      1 MLTPERHQLIIDQIEKHDVVKIQELINLTNASESTIRRDLSTLEERGFLK     50
                     ||||||:|||:|||||.|||||||||::||||||||||||||||||||||
RBAM_014120__      1 MLTPERYQLIMDQIEKRDVVKIQELISMTNASESTIRRDLSTLEERGFLK     50

BSNT_02400___     51 RVHGGAAKLSDIRLEPDMLEKSSKNLHDKLKIAEKAAFLLEEGDCIYLDA    100
                     ||||||:|||:.|.||||||||||||.|||||||:||.||||||||||||
RBAM_014120__     51 RVHGGASKLSNSRQEPDMLEKSSKNLQDKLKIAEEAASLLEEGDCIYLDA    100

BSNT_02400___    101 GTTTLHMIDFMDKTKDIVVVTNGVMHIDALIRKEISFYLLGGYVKHRTGA    150
                     ||||||||||:|.:|||||||||||||||||||.|.||||||||||||||
RBAM_014120__    101 GTTTLHMIDFIDPSKDIVVVTNGVMHIDALIRKGIPFYLLGGYVKHRTGA    150

BSNT_02400___    151 IIGGASLIAMDQYRFDKSFLGTNGVHTEAGFTTPDPDEALLKQKAIKQAK    200
                     :||||||.|:.||||||||||.||||.|||||||||||||||.||::|||
RBAM_014120__    151 MIGGASLTAVSQYRFDKSFLGVNGVHIEAGFTTPDPDEALLKTKAVRQAK    200

BSNT_02400___    201 HAYVLADPSKFGEISFSAFAAIGDATIITTDAEELTFDNYQEKTVVKVVK    250
                     :|||||||||||||||:||||:|||.||||:||||.||||||||||||||
RBAM_014120__    201 NAYVLADPSKFGEISFAAFAALGDAAIITTEAEELAFDNYQEKTVVKVVK    250

BSNT_02400___    251 P    251
                     |
RBAM_014120__    251 P    251


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