Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02396 and RBAM_014080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:06
# Commandline: needle
# -asequence pep-align/BSNT_02396___yknW.1.9828.seq
# -bsequence pep-align/RBAM_014080___yknW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02396___yknW-RBAM_014080___yknW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02396___yknW-RBAM_014080___yknW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02396___yknW
# 2: RBAM_014080___yknW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 130/232 (56.0%)
# Similarity: 170/232 (73.3%)
# Gaps: 1/232 ( 0.4%)
# Score: 671.0
#
#
#=======================================
BSNT_02396___ 1 METNVEKNSGTATEKPSLFGVITSPSVQFERIRERPAVWGPLLIVAAIII 50
||.|:||.:...|||||:|||||||.|||:|::|:|.:..|||||..:|.
RBAM_014080__ 1 MEPNLEKGNTAVTEKPSIFGVITSPVVQFKRLKEKPVIGIPLLIVIILIA 50
BSNT_02396___ 51 VGAVLQSLGTDYSELLKSQDTQGLSAEQMETVATITKFGGMAGAIIGGIA 100
.|::|:.||.:|.|:|.|....||:.:|:|...|..|||.|.|.|.|||.
RBAM_014080__ 51 AGSILRGLGMNYEEVLNSPSLDGLTDDQIEMTKTFAKFGTMFGGIFGGII 100
BSNT_02396___ 101 ALFIAPLIYWLCVKISGGVTTYKKMLSLGLFVSLISSLGLLVNGIVAFTT 150
||||.|||||||||||||||||||||||.||.:.|:::||.:||:|.:.|
RBAM_014080__ 101 ALFIVPLIYWLCVKISGGVTTYKKMLSLSLFTAFITNIGLAINGLVTYFT 150
BSNT_02396___ 151 DVNPLYSTTSLAGIIPSDGALASVLNTFEIFSIWSFVLLAIGLHKTGGIS 200
....||:.||||.:||:...:|..|:.|:||||||::|||:||..|||||
RBAM_014080__ 151 GAGSLYAVTSLASVIPAGDGVAVFLSAFDIFSIWSYILLALGLRYTGGIS 200
BSNT_02396___ 201 KKAGWISAIILFGILVVFSLFSGLINSV-AGA 231
|||.|.|||:||.|:::.|...||::|: ||.
RBAM_014080__ 201 KKAAWTSAIVLFVIMLLVSAVGGLLSSMTAGV 232
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