Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02380 and RBAM_014010

See DNA alignment / Visit BSNT_02380 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:06
# Commandline: needle
#    -asequence pep-align/BSNT_02380___yknT.1.9828.seq
#    -bsequence pep-align/RBAM_014010___yknT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02380___yknT-RBAM_014010___yknT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02380___yknT-RBAM_014010___yknT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02380___yknT
# 2: RBAM_014010___yknT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity:     191/334 (57.2%)
# Similarity:   240/334 (71.9%)
# Gaps:          17/334 ( 5.1%)
# Score: 954.0
# 
#
#=======================================

BSNT_02380___      1 MKRSGPFFHDVSQENLYLKSELSRCHKLIAELEASYFHQKNNKLLKENTD     50
                     ||.|||||||.||||||||||||||.|||:|.||||||||||||.:||.:
RBAM_014010__      1 MKISGPFFHDTSQENLYLKSELSRCRKLISEFEASYFHQKNNKLQEENAN     50

BSNT_02380___     51 MKEKLQQLSAELTHMSTKEKHASHTSQTLHQIRAELLDKIVVLQELLSAE    100
                     :||:|.:||.||..|:.|.|..|.|.::||:|||.||||||:|||||..|
RBAM_014010__     51 IKERLHKLSDELEAMAQKHKQTSDTERSLHEIRAGLLDKIVILQELLQQE    100

BSNT_02380___    101 TFKRRAEIEEKHKLHIAKVKIEEENKNLHKRISELQASIEQEQNALLQAK    150
                     ||:|:.|:||||:||:..||.||||||||.||..|:.:|:.|:.:....|
RBAM_014010__    101 TFRRKNEMEEKHRLHLTNVKFEEENKNLHTRIRSLETAIQTERTSHEDMK    150

BSNT_02380___    151 QQAELIKAENGRLKKQMVEKEYQLKHIKIEVDHMKDRIIETKERLLDIEK    200
                     |:......||.||:.||:||||||||||||::||:|||:||||||::|||
RBAM_014010__    151 QRYHAAADENTRLQTQMIEKEYQLKHIKIEINHMRDRILETKERLVEIEK    200

BSNT_02380___    201 TKEKLFHETIISYKRQLDESDAWIASHFADIDGGTKQKEKTEEEAPAVYA    250
                     ||||||.|||:||||||||||||||.||||||..|.:..:...|.|:|..
RBAM_014010__    201 TKEKLFQETILSYKRQLDESDAWIAGHFADIDSRTAEPAEQALEIPSVSK    250

BSNT_02380___    251 QPNHVETILEDVTKQIHVLQKQLARAQSSDQAKSHTIEELKNRAAEEKPY    300
                     :....|.:|:.||:|:..||||..:::|.||:....::.||.||..|||:
RBAM_014010__    251 ETVQAEDLLKAVTEQVISLQKQFVQSESRDQSFDEKLDALKERADGEKPF    300

BSNT_02380___    301 QKWVYKLNLEKENKPSQKK--PQ-----------    321
                     ||:|.||    |.||.::.  ||           
RBAM_014010__    301 QKYVVKL----EKKPGKEASLPQNKRESAKKLLE    330


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