Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02368 and RBAM_013970

See DNA alignment / Visit BSNT_02368 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_02368___ykuS.1.9828.seq
#    -bsequence pep-align/RBAM_013970___ykuS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02368___ykuS-RBAM_013970___ykuS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02368___ykuS-RBAM_013970___ykuS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02368___ykuS
# 2: RBAM_013970___ykuS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 81
# Identity:      67/81 (82.7%)
# Similarity:    73/81 (90.1%)
# Gaps:           0/81 ( 0.0%)
# Score: 348.0
# 
#
#=======================================

BSNT_02368___      1 MAKKIGIEQSLSDVEAALKEKGYDVVMMKSPADAQGCDCCVVTGLDNNVQ     50
                     |.|||||||||||||.|||:|||||||||:|.||:.||||||||||:|||
RBAM_013970__      1 MTKKIGIEQSLSDVEQALKQKGYDVVMMKTPEDAKNCDCCVVTGLDSNVQ     50

BSNT_02368___     51 GIADTVTQAPVITASGMTAEEICSEVESRIQ     81
                     |||||.|||||||||||||:|||||||.:..
RBAM_013970__     51 GIADTSTQAPVITASGMTADEICSEVEKKFH     81


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