Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02368 and RBAM_013970

See Amino acid alignment / Visit BSNT_02368 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence dna-align/BSNT_02368___ykuS.1.9828.seq
#    -bsequence dna-align/RBAM_013970___ykuS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02368___ykuS-RBAM_013970___ykuS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02368___ykuS-RBAM_013970___ykuS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02368___ykuS
# 2: RBAM_013970___ykuS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     199/247 (80.6%)
# Similarity:   199/247 (80.6%)
# Gaps:           2/247 ( 0.8%)
# Score: 791.0
# 
#
#=======================================

BSNT_02368___      1 ATGGCTAAAAAAATAGGAATTGAACAATCATTATCAGATGTAGAAGCTGC     50
                     |||.|.||||||||.||||||||||||||.|||||.|||||||||...||
RBAM_013970__      1 ATGACGAAAAAAATTGGAATTGAACAATCTTTATCGGATGTAGAACAGGC     50

BSNT_02368___     51 TTTAAAAGAAAAAGGATATGACGTTGTAATGATGAAAAGCCCTGCTGATG    100
                     .||||||.||||||||||||||||.||.||||||||.|..||||..||||
RBAM_013970__     51 GTTAAAACAAAAAGGATATGACGTAGTGATGATGAAGACTCCTGAGGATG    100

BSNT_02368___    101 CTCAAG-GCTGTGACTGCTGTGTCGTAACAGGTCTTGATAATAATGTGCA    149
                     | .||| ..||||||||||||||||||||.||.|||||.|..|||||.||
RBAM_013970__    101 C-GAAGAATTGTGACTGCTGTGTCGTAACCGGACTTGACAGCAATGTCCA    149

BSNT_02368___    150 AGGGATAGCCGATACGGTAACACAAGCACCTGTCATTACAGCTTCCGGGA    199
                     |||.||.|||||||||..|||.||.||.||.||||||||.||||||||.|
RBAM_013970__    150 AGGAATTGCCGATACGTCAACTCAGGCTCCCGTCATTACGGCTTCCGGAA    199

BSNT_02368___    200 TGACGGCTGAAGAAATTTGCAGCGAAGTTGAAAGCAGAATTCAGTAA    246
                     ||||.||.||.|||||.|||||||||||.||||..|.|.||||.|||
RBAM_013970__    200 TGACCGCCGACGAAATCTGCAGCGAAGTGGAAAAAAAATTTCATTAA    246


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