Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02367 and RBAM_013960
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:05
# Commandline: needle
# -asequence pep-align/BSNT_02367___ykuR.1.9828.seq
# -bsequence pep-align/RBAM_013960___ykuR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02367___ykuR-RBAM_013960___ykuR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02367___ykuR-RBAM_013960___ykuR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02367___ykuR
# 2: RBAM_013960___ykuR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 374
# Identity: 336/374 (89.8%)
# Similarity: 357/374 (95.5%)
# Gaps: 0/374 ( 0.0%)
# Score: 1778.0
#
#
#=======================================
BSNT_02367___ 1 MKKEELIAIRRDLHRIPELGFQEFKTQQYLLHVLEQYPQDRIEIEKWRTG 50
|:||.|||||||||||||:||||:|||||||::|.|||::|||||.||||
RBAM_013960__ 1 MEKERLIAIRRDLHRIPEIGFQEYKTQQYLLNLLNQYPEERIEIETWRTG 50
BSNT_02367___ 51 LFVKVNGTAPEKMLAYRADIDALSIEEQTGLPFASEHHGNMHACGHDLHM 100
:||||||||||||||||||||||||||||||||||||.|.|||||||:||
RBAM_013960__ 51 IFVKVNGTAPEKMLAYRADIDALSIEEQTGLPFASEHPGFMHACGHDMHM 100
BSNT_02367___ 101 TIALGIIDHFVHHPVKHDLLFLFQPAEEGPGGAEPMLESDVLKKWQPDFI 150
|||||||||||||||||||||||||||||||||||||||||||||.||.|
RBAM_013960__ 101 TIALGIIDHFVHHPVKHDLLFLFQPAEEGPGGAEPMLESDVLKKWTPDLI 150
BSNT_02367___ 151 TALHIAPELPVGTIATKSGLLFANTSELVIDLEGKGGHAAYPHLAEDMVV 200
||||||||||||||:||||||||||||||||||||||||||||.|:||||
RBAM_013960__ 151 TALHIAPELPVGTISTKSGLLFANTSELVIDLEGKGGHAAYPHTADDMVV 200
BSNT_02367___ 201 AASTLVTQLQTIISRNTDPLDSAVITVGTITGGSAQNIIAETAHLEGTIR 250
|||||||||||:|||||||||||||||||||||:|||||||.||||||||
RBAM_013960__ 201 AASTLVTQLQTVISRNTDPLDSAVITVGTITGGTAQNIIAEHAHLEGTIR 250
BSNT_02367___ 251 TLSEESMKQVKERIEDVVKGIEIGFRCKGKVTYPSVYHQVYNTSGLTEEF 300
|||||||:.||:|||::|||||||||||||||||||||||||||||||||
RBAM_013960__ 251 TLSEESMRMVKKRIEELVKGIEIGFRCKGKVTYPSVYHQVYNTSGLTEEF 300
BSNT_02367___ 301 MSFVAEHQLATVIEAKEAMTGEDFGYMLKKYPGFMFWLGADSEHGLHHAK 350
|.||::||||.|..||||||||||||||||||||||||||||.|||||||
RBAM_013960__ 301 MQFVSDHQLADVRTAKEAMTGEDFGYMLKKYPGFMFWLGADSSHGLHHAK 350
BSNT_02367___ 351 LNPDENAIETAVNVMTGYFSVYAN 374
|||||:|:|||||||.||||.|||
RBAM_013960__ 351 LNPDEDAMETAVNVMVGYFSKYAN 374
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