Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02363 and RBAM_013930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:05
# Commandline: needle
# -asequence pep-align/BSNT_02363___ykuO.1.9828.seq
# -bsequence pep-align/RBAM_013930___ykuO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02363___ykuO-RBAM_013930___ykuO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02363___ykuO-RBAM_013930___ykuO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02363___ykuO
# 2: RBAM_013930___ykuO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity: 195/297 (65.7%)
# Similarity: 243/297 (81.8%)
# Gaps: 0/297 ( 0.0%)
# Score: 1114.0
#
#
#=======================================
BSNT_02363___ 1 MFHKGATAVTASAFSGYFVAVQREGIFHYSLEQGWRKLFRLKSKIHCISY 50
|||||||||.||..|||||||:.|||||:|.|:||::|||:||:||.::|
RBAM_013930__ 1 MFHKGATAVMASVTSGYFVAVKDEGIFHFSAEEGWKRLFRVKSRIHVLTY 50
BSNT_02363___ 51 IGPYLFGVGEKGTVIRSADEGKTWTMSSFPTNATVWAIIGRNNGFVCAHG 100
||||:|..||||.|:||||:|||||.|.|||||:|||:.|||:|||||||
RBAM_013930__ 51 IGPYIFAAGEKGAVLRSADQGKTWTASRFPTNASVWAVAGRNDGFVCAHG 100
BSNT_02363___ 101 KHCIYVSDDFGVSWRVAKPFAEFHNPPVIRSLCLHGGNLFIGTQIHEYFG 150
.:|:|:||||||:|.|||||::...|||||||||||..::|||:||...|
RBAM_013930__ 101 TYCLYLSDDFGVTWHVAKPFSQLKEPPVIRSLCLHGQTIYIGTRIHMNHG 150
BSNT_02363___ 151 GIWAYDIKRDTVQVVKKEKNRMTASMLVFNENWLVAAMGSVKGKHGAVTV 200
||||||:..|.::.:.:|:.||||||.::..:||:||.|:.||:.|.|.|
RBAM_013930__ 151 GIWAYDLTEDRIRRISRERQRMTASMRMYQNDWLIAAKGAAKGERGEVAV 200
BSNT_02363___ 201 RNLLNGEEFIIQSSMIRIEESFLDLSEDDGIIYVTTTQDENGFSRIYQAD 250
||:...|||.|.:.....|:||||:|||:||||||::|||||||||||||
RBAM_013930__ 201 RNVRTQEEFAITAGPAVREKSFLDVSEDNGIIYVTSSQDENGFSRIYQAD 250
BSNT_02363___ 251 LEARSLKWFDTIKGHGWRVANQKENFFCAGLYECKFVQPYEVSAMIH 297
|.|..|||||||:||||||||::||||||||||.|||:|||...:.|
RBAM_013930__ 251 LAAGELKWFDTIRGHGWRVANREENFFCAGLYESKFVRPYEAVRLAH 297
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