Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02361 and RBAM_013910

See DNA alignment / Visit BSNT_02361 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_02361___ccpC.1.9828.seq
#    -bsequence pep-align/RBAM_013910___ccpC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02361___ccpC-RBAM_013910___ccpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02361___ccpC-RBAM_013910___ccpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02361___ccpC
# 2: RBAM_013910___ccpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 293
# Identity:     279/293 (95.2%)
# Similarity:   284/293 (96.9%)
# Gaps:           0/293 ( 0.0%)
# Score: 1462.0
# 
#
#=======================================

BSNT_02361___      1 MQLQELHMLVVLAEELNMRKAAERLFVSQPALSQRLQTIEKAWGKKIFLR     50
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_013910__      1 MQLQELHMLVVLAEELNMRKAAERLFVSQPALSQRLQTIEKAWGTKIFLR     50

BSNT_02361___     51 SQKGLTVTPAGEKIIQFANDVTLEQERIRENIDELEGEIHGTLKLAVASI    100
                     ||||||||||||||||||||||..||||||||||||||||||||||||||
RBAM_013910__     51 SQKGLTVTPAGEKIIQFANDVTDRQERIRENIDELEGEIHGTLKLAVASI    100

BSNT_02361___    101 IGQHWLPKVLKTYVEKYPNAKISLITGWSSEMLKSLYEDQVHIGIIRGNP    150
                     |||||||||||||||:|||||:||||||||||||||||||||||||||||
RBAM_013910__    101 IGQHWLPKVLKTYVERYPNAKVSLITGWSSEMLKSLYEDQVHIGIIRGNP    150

BSNT_02361___    151 EWKGRKDYLMTDHLYLVDTEISCIEDIAHTERPFIQFKSDSTYFQEIQHW    200
                     ||||||||||||||||||||||||:|||||:|||||||||||||||||||
RBAM_013910__    151 EWKGRKDYLMTDHLYLVDTEISCIDDIAHTDRPFIQFKSDSTYFQEIQHW    200

BSNT_02361___    201 WHQKFKTSPKQTILVDQIETCKQMALHGIGYAILPSVTLQNEDKVNKMPL    250
                     |||||||||||||||||||||||||||||||||||||||:.|||||||||
RBAM_013910__    201 WHQKFKTSPKQTILVDQIETCKQMALHGIGYAILPSVTLEEEDKVNKMPL    250

BSNT_02361___    251 LDMKGHPIGRDTWLLGYEPAFELKQVQAFVQVIKDMLDQENPF    293
                     ||.|.|||||||||||||||||||||||||.||||||.||.||
RBAM_013910__    251 LDTKDHPIGRDTWLLGYEPAFELKQVQAFVSVIKDMLKQERPF    293


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.