Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02361 and RBAM_013910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:05
# Commandline: needle
# -asequence dna-align/BSNT_02361___ccpC.1.9828.seq
# -bsequence dna-align/RBAM_013910___ccpC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02361___ccpC-RBAM_013910___ccpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02361___ccpC-RBAM_013910___ccpC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02361___ccpC
# 2: RBAM_013910___ccpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 887
# Identity: 730/887 (82.3%)
# Similarity: 730/887 (82.3%)
# Gaps: 10/887 ( 1.1%)
# Score: 3019.0
#
#
#=======================================
BSNT_02361___ 1 ATGCAGCTTCAAGAGCTTCATATGCTCGTAGTTTTAGCTGAGGAATTAAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_013910__ 1 ATGCAGCTTCAAGAGCTTCATATGCTCGTAGTTTTAGCTGAGGAATTAAA 50
BSNT_02361___ 51 TATGAGAAAGGCGGCAGAACGGCTTTTTGTATCTCAGCCGGCTTTATCTC 100
.|||||.|||||.||.||||||.|.||.||.||.|||||||||.|.||.|
RBAM_013910__ 51 CATGAGGAAGGCTGCCGAACGGTTATTCGTGTCACAGCCGGCTCTGTCCC 100
BSNT_02361___ 101 AGCGCTTACAAACCATTGAAAAGGCGTGGGGAAAAAAAATCTTTTTAAGA 150
||||.||.||.|||||||||||.||.|||||||.|||.||||||.|.||.
RBAM_013910__ 101 AGCGATTGCAGACCATTGAAAAAGCCTGGGGAACAAAGATCTTTCTTAGG 150
BSNT_02361___ 151 TCTCAAAAAGGATTAACGGTAACGCCCGCCGGTGAGAAAATCATTCAGTT 200
||||||||||||.|.|||||||||||.||.||.||.||||||||.||.||
RBAM_013910__ 151 TCTCAAAAAGGACTTACGGTAACGCCGGCAGGAGAAAAAATCATACAATT 200
BSNT_02361___ 201 TGCGAATGATGTGACATTAGA---GCAGGAAAGAATAAGAGAAAATATTG 247
|||.|||||.||.|| .|| |||.||||||||.||||||||.||||
RBAM_013910__ 201 TGCAAATGACGTCAC---GGATCGGCAAGAAAGAATCAGAGAAAACATTG 247
BSNT_02361___ 248 ACGAGCTTGAAGGTGAAATTCACGGCACATTGAAGCTTGCCGTCGCCTCC 297
|.||.|||||.|||||.||||||||||||||.|||||||||||||||||.
RBAM_013910__ 248 ATGAACTTGAGGGTGAGATTCACGGCACATTAAAGCTTGCCGTCGCCTCG 297
BSNT_02361___ 298 ATAATCGGTCAGCATTGGCTCCCTAAAGTCCTGAAGACGTATGTTGAAAA 347
||.|||||.|||||.|||||.||.|||||..|.||.||.|||||.|||..
RBAM_013910__ 298 ATTATCGGGCAGCACTGGCTTCCGAAAGTGTTAAAAACATATGTGGAACG 347
BSNT_02361___ 348 GTATCCGAATGCAAAGATCTCGCTCATAACCGGGTGGAGCAGCGAAATGC 397
.|||||||||||||||.||||.|||||.||.|||||||||||||||||||
RBAM_013910__ 348 ATATCCGAATGCAAAGGTCTCTCTCATTACAGGGTGGAGCAGCGAAATGC 397
BSNT_02361___ 398 TGAAAAGCTTGTATGAGGATCAGGTTCATATCGGCATTATAAGAGGCAAC 447
|||||||..|||||||.||||||||.||||||||||||||..|.||.||.
RBAM_013910__ 398 TGAAAAGTCTGTATGAAGATCAGGTACATATCGGCATTATCCGGGGAAAT 447
BSNT_02361___ 448 CCTGAGTGGAAGGGGCGCAAAGATTACTTAATGACAGATCATCTGTATTT 497
||.||.|||||.||.||.||||||||.||||||||.||||||.|.|||||
RBAM_013910__ 448 CCGGAATGGAAAGGCCGGAAAGATTATTTAATGACCGATCATTTATATTT 497
BSNT_02361___ 498 AGTGGATACTGAAATTTCCTGCATCGAAGATATTGCCCATACAGAACGGC 547
.||.|||||.|||||||||||.||.||.||||||||||||||.||.||||
RBAM_013910__ 498 GGTCGATACGGAAATTTCCTGTATTGATGATATTGCCCATACCGATCGGC 547
BSNT_02361___ 548 CGTTTATCCAGTTTAAAAGTGATAGCACTTATTTTCAGGAAATTCAGCAC 597
||||.|||||.||.||||||||.||.||.||||||||||||||||||||.
RBAM_013910__ 548 CGTTCATCCAATTCAAAAGTGACAGTACATATTTTCAGGAAATTCAGCAT 597
BSNT_02361___ 598 TGGTGGCATCAAAAATTTAAAACGTCGCCGAAACAGACGATATTGGTTGA 647
|||||||||||||||||.|||||.||||||||||||||.||..|.||.||
RBAM_013910__ 598 TGGTGGCATCAAAAATTCAAAACCTCGCCGAAACAGACCATCCTTGTCGA 647
BSNT_02361___ 648 TCAGATTGAAACGTGCAAACAGATGGCGCTGCACGGAATCGGTTATGCCA 697
||||||||||||||||||.|||||||||||||||||.|||||.|||||||
RBAM_013910__ 648 TCAGATTGAAACGTGCAAGCAGATGGCGCTGCACGGGATCGGATATGCCA 697
BSNT_02361___ 698 TTTTGCCGTCTGTTACCCTTCAAAATGAAGATAAAGTGAATAAAATGCCT 747
||.|||||||.||.|||.|..||.|.|||||.|||||.|||||||||||.
RBAM_013910__ 698 TTCTGCCGTCAGTCACCTTAGAAGAGGAAGACAAAGTAAATAAAATGCCC 747
BSNT_02361___ 748 CT--TTTAGACATGAAAGGGCATCCGATCGGTCGGGATACATGGTTATTA 795
|| ||.|.||| ||||..|||||||||||.||.||.||||||.|..|.
RBAM_013910__ 748 CTGCTTGATACA--AAAGATCATCCGATCGGCCGTGACACATGGCTGCTC 795
BSNT_02361___ 796 GGCTATGAGCCTGCCTTTGAACTGAAACAAGTTCAAGCTTTTGTACAAGT 845
||.||||||||.||.||||||.|.|||||.||.||.||||||||....||
RBAM_013910__ 796 GGTTATGAGCCGGCATTTGAATTAAAACAGGTGCAGGCTTTTGTTTCTGT 845
BSNT_02361___ 846 GATAAAGGATATGCTGGATCAGGAAAATCCATTTTAA 882
.||.||.|||||||||.|.||||||...||||||||.
RBAM_013910__ 846 CATTAAAGATATGCTGAAGCAGGAACGCCCATTTTAG 882
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