Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02360 and RBAM_013900

See DNA alignment / Visit BSNT_02360 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence pep-align/BSNT_02360___ykuL.1.9828.seq
#    -bsequence pep-align/RBAM_013900___ykuL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02360___ykuL-RBAM_013900___ykuL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02360___ykuL-RBAM_013900___ykuL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02360___ykuL
# 2: RBAM_013900___ykuL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:     137/147 (93.2%)
# Similarity:   141/147 (95.9%)
# Gaps:           0/147 ( 0.0%)
# Score: 690.0
# 
#
#=======================================

BSNT_02360___      1 MISLQSDQLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPV     50
                     ||||||||||:|||||||||||||||||||||||||||||||||||||||
RBAM_013900__      1 MISLQSDQLLDATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPV     50

BSNT_02360___     51 LDPSYRLHGLIRTNMIMNSIFGLERIEFEKLDQITVEEVMLTDIPRLHIN    100
                     ||.||||||||.|||||||||||||||||||||||||||||.||||||||
RBAM_013900__     51 LDASYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVMLKDIPRLHIN    100

BSNT_02360___    101 DPIMKGFGMVINNGFVCVENDEQVFEGIFTRRVVLKELNKHIRSLNK    147
                     |||:|||.||||||||||||||.|||||||||||||:|:.|||||||
RBAM_013900__    101 DPIIKGFSMVINNGFVCVENDEGVFEGIFTRRVVLKQLSSHIRSLNK    147


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