Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02360 and RBAM_013900

See Amino acid alignment / Visit BSNT_02360 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence dna-align/BSNT_02360___ykuL.1.9828.seq
#    -bsequence dna-align/RBAM_013900___ykuL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02360___ykuL-RBAM_013900___ykuL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02360___ykuL-RBAM_013900___ykuL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02360___ykuL
# 2: RBAM_013900___ykuL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 446
# Identity:     373/446 (83.6%)
# Similarity:   373/446 (83.6%)
# Gaps:           4/446 ( 0.9%)
# Score: 1568.0
# 
#
#=======================================

BSNT_02360___      1 ATGATAAGCTTACAATCAGATCAACTTCTTGAGGCAACAGTCGGACAATT     50
                     |||||.|||||||||||||||||.||||||||.|||||||||||||||||
RBAM_013900__      1 ATGATTAGCTTACAATCAGATCAGCTTCTTGATGCAACAGTCGGACAATT     50

BSNT_02360___     51 TATGATTGAGGCGGACAAAGTAGCGCACGTGCAAGTCGGAAATAACCTTG    100
                     ||||||.||||||||.|||||.||||||||.|||||||||||.|||||||
RBAM_013900__     51 TATGATCGAGGCGGATAAAGTGGCGCACGTTCAAGTCGGAAACAACCTTG    100

BSNT_02360___    101 AGCACGCATTATTAGTATTGACAAAAACCGGATACACTGCCATCCCGGTT    150
                     ||||.||..|||||||..||||.||||||||.||.||.|||||.||.||.
RBAM_013900__    101 AGCATGCTCTATTAGTGCTGACGAAAACCGGCTATACCGCCATTCCCGTC    150

BSNT_02360___    151 CTGGATCCTTCCTACCGTTTACATGGCTTAATCAGGACAAATATGATCAT    200
                     ||.||..||||.||||||.|.||.||.||.|||.|||||||||||||.||
RBAM_013900__    151 CTTGACGCTTCGTACCGTCTGCACGGTTTGATCGGGACAAATATGATTAT    200

BSNT_02360___    201 GAACAGTATTTTTGGACTTGAGCGAATTGAGTTTGAAAAGCTTGACCAAA    250
                     ||||||.|||||.||||||||.||.||.||||||||.|||||.||.||||
RBAM_013900__    201 GAACAGCATTTTCGGACTTGAACGGATCGAGTTTGAGAAGCTGGATCAAA    250

BSNT_02360___    251 TCACTGTTGAGGAAGTCATGCTGACCGACATTCCGCGCCTTCATATCAAT    300
                     |.||.|||||||||||||||||||..||||||||.||.||.||.||||||
RBAM_013900__    251 TTACGGTTGAGGAAGTCATGCTGAAAGACATTCCCCGTCTCCACATCAAT    300

BSNT_02360___    301 GATCCGATTATGAAGGGATTCGGCATGGTCATTAATAACGGATTTGTCTG    350
                     |||||||||||.||.||.|||.|||||||||||||.|||||.||||||||
RBAM_013900__    301 GATCCGATTATCAAAGGGTTCAGCATGGTCATTAACAACGGCTTTGTCTG    350

BSNT_02360___    351 TGTTGAAAATGACGAGCAG--GTATTTGAAGGGATTTTTACGAGAAGAGT    398
                     .|||||||||||.||  ||  ||.||||||||.|||||.|||||||||||
RBAM_013900__    351 CGTTGAAAATGATGA--AGGCGTCTTTGAAGGCATTTTCACGAGAAGAGT    398

BSNT_02360___    399 CGTTTTAAAGGAATTGAATAAGCATATACGCTCGTTGAATAAGTAG    444
                     |||.||||||.|.||||..|..|||||..|.||.||||||||||||
RBAM_013900__    399 CGTATTAAAGCAGTTGAGCAGCCATATCAGATCATTGAATAAGTAG    444


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