Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02358 and RBAM_013880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence pep-align/BSNT_02358___ykuK.1.9828.seq
# -bsequence pep-align/RBAM_013880___ykuK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02358___ykuK-RBAM_013880___ykuK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02358___ykuK-RBAM_013880___ykuK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02358___ykuK
# 2: RBAM_013880___ykuK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity: 150/172 (87.2%)
# Similarity: 162/172 (94.2%)
# Gaps: 0/172 ( 0.0%)
# Score: 786.0
#
#
#=======================================
BSNT_02358___ 1 MADSFLFYNLSEAQMTFQDVMERLKAFVQKDPRSSYVLSIGTDSQVYRDY 50
||||||||||||||||||||.||||.||.|||||:||||:|||||||||:
RBAM_013880__ 1 MADSFLFYNLSEAQMTFQDVTERLKRFVNKDPRSAYVLSVGTDSQVYRDF 50
BSNT_02358___ 51 TKFITALHLHRTGKGAWGCLKNHTVDRPIHSLREKISLETAYSQETAAHI 100
||||||:||||||||||||||||.:.|||||||||||||||:|||.||||
RBAM_013880__ 51 TKFITAIHLHRTGKGAWGCLKNHDLARPIHSLREKISLETAFSQEMAAHI 100
BSNT_02358___ 101 LDGHLMDITDLLLPFTGEGADLTFEVHLDIGKKGLTKDLIQEMTGRITSM 150
|||.||::|||||||..|||||:||||||||:|||||:||||||||||||
RBAM_013880__ 101 LDGRLMEMTDLLLPFADEGADLSFEVHLDIGQKGLTKELIQEMTGRITSM 150
BSNT_02358___ 151 GIEAKIKPDSYTAFSYANRFTK 172
||||||||||.||||||||:||
RBAM_013880__ 151 GIEAKIKPDSCTAFSYANRYTK 172
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