Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02358 and RBAM_013880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence dna-align/BSNT_02358___ykuK.1.9828.seq
# -bsequence dna-align/RBAM_013880___ykuK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02358___ykuK-RBAM_013880___ykuK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02358___ykuK-RBAM_013880___ykuK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02358___ykuK
# 2: RBAM_013880___ykuK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 521
# Identity: 420/521 (80.6%)
# Similarity: 420/521 (80.6%)
# Gaps: 4/521 ( 0.8%)
# Score: 1672.0
#
#
#=======================================
BSNT_02358___ 1 ATGGCTGATTCTTTTCTGTTTTATAATCTTTCAGAAGCACAGATGACCTT 50
||||||||||||||||||||||||||||||||.||.||||||||||||||
RBAM_013880__ 1 ATGGCTGATTCTTTTCTGTTTTATAATCTTTCTGAGGCACAGATGACCTT 50
BSNT_02358___ 51 TCAAGATGTGATGGAACGGCTTAAAGCCTTTGTTCAA-AAGGACCCCCGT 99
||||||.||||.|||.|||||.|||..||||| |||| ||.|||||||||
RBAM_013880__ 51 TCAAGACGTGACGGAGCGGCTGAAACGCTTTG-TCAATAAAGACCCCCGT 99
BSNT_02358___ 100 TCTTCTTATGTGTTATCGATCGGAACCGATTCACAGGTTTACCGCGATTA 149
||..|.||.|||.|.||..|.||.||.||||||||.|||||||||||.|.
RBAM_013880__ 100 TCAGCATACGTGCTGTCTGTAGGGACTGATTCACAAGTTTACCGCGACTT 149
BSNT_02358___ 150 CACAAAGTTTATTACCGCATTGCATTTGCATCGTACAGGCAAGGGAGCTT 199
|||||||||||||||.||..|.||.|||||.|||||||||||||||||||
RBAM_013880__ 150 CACAAAGTTTATTACGGCTATACACTTGCACCGTACAGGCAAGGGAGCTT 199
BSNT_02358___ 200 GGGGCTGCTTGAAAAATCATACAGTCGACAGACCCATACATAGCCTTCGG 249
|||||||.||||||||||||....|.|..|||||.||||||||||||||.
RBAM_013880__ 200 GGGGCTGTTTGAAAAATCATGATCTTGCAAGACCGATACATAGCCTTCGC 249
BSNT_02358___ 250 GAGAAGATTTCGTTAGAAACGGCGTACAGCCAAGAAACGGCCGCTCATAT 299
||.||.||||||.|.|||||.||||.||||||.||.|.|||.||.||.||
RBAM_013880__ 250 GAAAAAATTTCGCTGGAAACCGCGTTCAGCCAGGAGATGGCTGCGCACAT 299
BSNT_02358___ 300 TCTTGATGGAC-ACTTAATGGATATTACCGATCTGCTCCTGCCCTTTACC 348
.||.||.||.| .||| |||||.||.||.|||.|.|||.||||.|||.|.
RBAM_013880__ 300 CCTCGACGGCCGTCTT-ATGGAAATGACAGATTTACTCTTGCCTTTTGCG 348
BSNT_02358___ 349 GGTGAGGGGGCGGATCTTACCTTTGAAGTTCACTTGGATATTGGGAAAAA 398
|.|||.||||||||||||.|.||||||||.||..|||||||.||..||||
RBAM_013880__ 349 GATGAAGGGGCGGATCTTTCATTTGAAGTGCATCTGGATATCGGTCAAAA 398
BSNT_02358___ 399 AGGGCTTACAAAAGATCTGATCCAGGAAATGACTGGACGTATTACCTCCA 448
|||.||.||||||||..||||.||.||||||||.||.||.||||||||.|
RBAM_013880__ 399 AGGACTGACAAAAGAATTGATACAAGAAATGACCGGCCGCATTACCTCGA 448
BSNT_02358___ 449 TGGGGATTGAGGCCAAAATAAAGCCGGATTCATACACTGCCTTCAGCTAT 498
||||.|||||.||.|||||.|||||.|||||.|.|||.||.|||||.|||
RBAM_013880__ 449 TGGGCATTGAAGCGAAAATCAAGCCCGATTCCTGCACAGCATTCAGTTAT 498
BSNT_02358___ 499 GCAAATCGTTTCACAAAATAA 519
||.|||||||.||||||||||
RBAM_013880__ 499 GCCAATCGTTACACAAAATAA 519
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