Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02350 and RBAM_013820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence pep-align/BSNT_02350___ykuC.1.9828.seq
# -bsequence pep-align/RBAM_013820___ykuC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02350___ykuC-RBAM_013820___ykuC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02350___ykuC-RBAM_013820___ykuC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02350___ykuC
# 2: RBAM_013820___ykuC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity: 361/430 (84.0%)
# Similarity: 398/430 (92.6%)
# Gaps: 0/430 ( 0.0%)
# Score: 1916.0
#
#
#=======================================
BSNT_02350___ 1 MDIFKNRNFVRLFFAALASQMGTTVGNMAFAFFLLDRFSSQPSYTTLAEL 50
||||||||||||||||||||||||||||||||:|||.||:||:|||||||
RBAM_013820__ 1 MDIFKNRNFVRLFFAALASQMGTTVGNMAFAFYLLDHFSNQPAYTTLAEL 50
BSNT_02350___ 51 MYSLPTIFVFLIVGVVADRFDRKKVAENCDWIRAGLTVVLFFTLFTGNIP 100
||||||:||||||||.|||.|||||||||||||||||:|||..|:||:||
RBAM_013820__ 51 MYSLPTVFVFLIVGVAADRLDRKKVAENCDWIRAGLTIVLFAALYTGSIP 100
BSNT_02350___ 101 LVFCILFIRSAVTKFFFPAENSLVQAILPKEHYAKAAGLNQMLFSIFMVF 150
||||||||||||||||||||.||||||||||||||||||||:||||||||
RBAM_013820__ 101 LVFCILFIRSAVTKFFFPAEASLVQAILPKEHYAKAAGLNQILFSIFMVF 150
BSNT_02350___ 151 GVGIGAFMYNTIGIEGAIILDFVSFIISGLLIRSCRIPKEARQPNGAFSW 200
|||||||||.||||.|||||||||||:||.|||:||||||||||||.|.|
RBAM_013820__ 151 GVGIGAFMYKTIGIHGAIILDFVSFIVSGFLIRACRIPKEARQPNGPFKW 200
BSNT_02350___ 201 RKTSVKDSINDFREGILYILKNKLLASLIFGFFIFGFVNGGFAVLPMFTM 250
..:.:|||:.||:|||:||:||||||||||||||||||||||||||||||
RBAM_013820__ 201 GDSFLKDSVADFKEGIVYIVKNKLLASLIFGFFIFGFVNGGFAVLPMFTM 250
BSNT_02350___ 251 KYGLAPDRYEWHTSVFTIALGFGLLAGSVIGTIISKKVKPHFLMSIPIFI 300
|||||||.||.|||:||:||||||||||||||:|:||||||.||||||..
RBAM_013820__ 251 KYGLAPDHYESHTSIFTVALGFGLLAGSVIGTMIAKKVKPHHLMSIPILA 300
BSNT_02350___ 301 AGLLIFVLGYTNILWVYYAAAFALGMCIGPINIAIGGWMPKIVHPKLMGR 350
|||||||||||:.||:||||||.|||||||:|||||||||||||||:|||
RBAM_013820__ 301 AGLLIFVLGYTDKLWIYYAAAFVLGMCIGPVNIAIGGWMPKIVHPKIMGR 350
BSNT_02350___ 351 VSGMQDPFMMFAQSLTLGLVALLFPKFVSNIDYLYYGMGVIILLVFIFYF 400
|||.||||||||||:|||||||||||||:||||||||||::||.||:|||
RBAM_013820__ 351 VSGWQDPFMMFAQSITLGLVALLFPKFVTNIDYLYYGMGIVILAVFVFYF 400
BSNT_02350___ 401 IALPKYSAQAVEVNVQEAFQEQPKKKARSV 430
||||||||:..|::||::.:...:|.|:.|
RBAM_013820__ 401 IALPKYSAETAEIDVQQSLKADSEKHAKPV 430
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