Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02350 and RBAM_013820

See DNA alignment / Visit BSNT_02350 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:04
# Commandline: needle
#    -asequence pep-align/BSNT_02350___ykuC.1.9828.seq
#    -bsequence pep-align/RBAM_013820___ykuC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02350___ykuC-RBAM_013820___ykuC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02350___ykuC-RBAM_013820___ykuC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02350___ykuC
# 2: RBAM_013820___ykuC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity:     361/430 (84.0%)
# Similarity:   398/430 (92.6%)
# Gaps:           0/430 ( 0.0%)
# Score: 1916.0
# 
#
#=======================================

BSNT_02350___      1 MDIFKNRNFVRLFFAALASQMGTTVGNMAFAFFLLDRFSSQPSYTTLAEL     50
                     ||||||||||||||||||||||||||||||||:|||.||:||:|||||||
RBAM_013820__      1 MDIFKNRNFVRLFFAALASQMGTTVGNMAFAFYLLDHFSNQPAYTTLAEL     50

BSNT_02350___     51 MYSLPTIFVFLIVGVVADRFDRKKVAENCDWIRAGLTVVLFFTLFTGNIP    100
                     ||||||:||||||||.|||.|||||||||||||||||:|||..|:||:||
RBAM_013820__     51 MYSLPTVFVFLIVGVAADRLDRKKVAENCDWIRAGLTIVLFAALYTGSIP    100

BSNT_02350___    101 LVFCILFIRSAVTKFFFPAENSLVQAILPKEHYAKAAGLNQMLFSIFMVF    150
                     ||||||||||||||||||||.||||||||||||||||||||:||||||||
RBAM_013820__    101 LVFCILFIRSAVTKFFFPAEASLVQAILPKEHYAKAAGLNQILFSIFMVF    150

BSNT_02350___    151 GVGIGAFMYNTIGIEGAIILDFVSFIISGLLIRSCRIPKEARQPNGAFSW    200
                     |||||||||.||||.|||||||||||:||.|||:||||||||||||.|.|
RBAM_013820__    151 GVGIGAFMYKTIGIHGAIILDFVSFIVSGFLIRACRIPKEARQPNGPFKW    200

BSNT_02350___    201 RKTSVKDSINDFREGILYILKNKLLASLIFGFFIFGFVNGGFAVLPMFTM    250
                     ..:.:|||:.||:|||:||:||||||||||||||||||||||||||||||
RBAM_013820__    201 GDSFLKDSVADFKEGIVYIVKNKLLASLIFGFFIFGFVNGGFAVLPMFTM    250

BSNT_02350___    251 KYGLAPDRYEWHTSVFTIALGFGLLAGSVIGTIISKKVKPHFLMSIPIFI    300
                     |||||||.||.|||:||:||||||||||||||:|:||||||.||||||..
RBAM_013820__    251 KYGLAPDHYESHTSIFTVALGFGLLAGSVIGTMIAKKVKPHHLMSIPILA    300

BSNT_02350___    301 AGLLIFVLGYTNILWVYYAAAFALGMCIGPINIAIGGWMPKIVHPKLMGR    350
                     |||||||||||:.||:||||||.|||||||:|||||||||||||||:|||
RBAM_013820__    301 AGLLIFVLGYTDKLWIYYAAAFVLGMCIGPVNIAIGGWMPKIVHPKIMGR    350

BSNT_02350___    351 VSGMQDPFMMFAQSLTLGLVALLFPKFVSNIDYLYYGMGVIILLVFIFYF    400
                     |||.||||||||||:|||||||||||||:||||||||||::||.||:|||
RBAM_013820__    351 VSGWQDPFMMFAQSITLGLVALLFPKFVTNIDYLYYGMGIVILAVFVFYF    400

BSNT_02350___    401 IALPKYSAQAVEVNVQEAFQEQPKKKARSV    430
                     ||||||||:..|::||::.:...:|.|:.|
RBAM_013820__    401 IALPKYSAETAEIDVQQSLKADSEKHAKPV    430


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