Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02342 and RBAM_013770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:03
# Commandline: needle
# -asequence pep-align/BSNT_02342___kinA.1.9828.seq
# -bsequence pep-align/RBAM_013770___kinA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02342___kinA-RBAM_013770___kinA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02342___kinA-RBAM_013770___kinA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02342___kinA
# 2: RBAM_013770___kinA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 615
# Identity: 375/615 (61.0%)
# Similarity: 411/615 (66.8%)
# Gaps: 151/615 (24.6%)
# Score: 1884.0
#
#
#=======================================
BSNT_02342___ 1 MEQDTQHVKPLQTKTDIHAVLASNGRIIYISANSKLHLGYLQGEMIGSFL 50
|||||||||..|:|||:||||.|||||:|||||.|.:..|.|.|||||||
RBAM_013770__ 1 MEQDTQHVKQFQSKTDLHAVLTSNGRIMYISANCKSYFSYSQEEMIGSFL 50
BSNT_02342___ 51 KTFLHEEDQFLVESYFYNEHHLMPCTFRFIKKDHTIVWVEAAVEIVTTRA 100
||||||||||||||||||||||||||||.|||||||||:||.|||||.:.
RBAM_013770__ 51 KTFLHEEDQFLVESYFYNEHHLMPCTFRLIKKDHTIVWLEAGVEIVTPQM 100
BSNT_02342___ 101 ERTEREIILKMKVLEEETGHQSLNCE--KHEIEPASPESTTYITDDYERL 148
|.|:||||||:|||||:|..:....| |.:.|..|.::.. ..::|||
RBAM_013770__ 101 EGTDREIILKIKVLEEKTPRRPYMYEQKKQKAEQQSEDAAG--NGEFERL 148
BSNT_02342___ 149 VENLPSPLCISVKGKIVYVNSAMLSMLGAKSKDAIIGKWSYEFIEEEYHD 198
||.||:||.:|:.|.|.|.|:|||:||||.|||.:||:.|||||||||||
RBAM_013770__ 149 VEMLPNPLYVSINGTIAYANNAMLAMLGADSKDEVIGRRSYEFIEEEYHD 198
BSNT_02342___ 199 IVKNRIIRMQKGMEVGMIEQTWKRLDGTPVHLEVKASPTVYKNQQAE-LL 247
||||||:|||||||||||||||:|||||||||||||:||.||||:|| ||
RBAM_013770__ 199 IVKNRIVRMQKGMEVGMIEQTWRRLDGTPVHLEVKAAPTTYKNQRAELLL 248
BSNT_02342___ 248 LIDISSRKKFQTILQKSRERYQLLIQNSIDTIAVIHNGKWVFMNESGISL 297
|||||||||||||||||||||||||||||||||||||.||||||||||||
RBAM_013770__ 249 LIDISSRKKFQTILQKSRERYQLLIQNSIDTIAVIHNDKWVFMNESGISL 298
BSNT_02342___ 298 FEAATYEDLIGKNIYDQLHPCDHEDVKERIQNIAEQKTESEIVKQSWFTF 347
|||.|||||||||:|||||||||:.||:|||||..:||||||:|||||||
RBAM_013770__ 299 FEAETYEDLIGKNVYDQLHPCDHDGVKQRIQNIINRKTESEIIKQSWFTF 348
BSNT_02342___ 348 QNRVIYTEMVCIPTTFFGEAAVQVILRDISERKQTEELMLKSEKLSIAGQ 397
:||:|||||||||||||||.||||||||||||||||||||||||||||||
RBAM_013770__ 349 KNRLIYTEMVCIPTTFFGETAVQVILRDISERKQTEELMLKSEKLSIAGQ 398
BSNT_02342___ 398 LAAGIAHEIRNPLTAIKGFLQLMKPTMEGNEHYFDIVFSELSRIELILSE 447
||||||||||||||||||||||||||||.|||||:|||||||||||||||
RBAM_013770__ 399 LAAGIAHEIRNPLTAIKGFLQLMKPTMEENEHYFEIVFSELSRIELILSE 448
BSNT_02342___ 448 LLML---AKPQQNAVKEYLNLKKLIGEVSALLETQANLNGIFIRTSYEKD 494
|||| ||.::.|.|...|.|
RBAM_013770__ 449 LLMLATSAKRRERACKLKENYK---------------------------- 470
BSNT_02342___ 495 SIYINGDQNQLKQVFINLIKNAVESMPDGGTVDIIITEDEHSVHVTVKDE 544
RBAM_013770__ 470 -------------------------------------------------- 470
BSNT_02342___ 545 GEGIPEKVLNRIGEPFLTTKEKGTGLGLMVTFNIIENHQGVIHVDSHPEK 594
RBAM_013770__ 470 -------------------------------------------------- 470
BSNT_02342___ 595 GTAFKISFPKNKTTA 609
RBAM_013770__ 470 --------------- 470
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