Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02340 and RBAM_013760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:03
# Commandline: needle
# -asequence pep-align/BSNT_02340___ykuA.1.9828.seq
# -bsequence pep-align/RBAM_013760___ykuA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02340___ykuA-RBAM_013760___ykuA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02340___ykuA-RBAM_013760___ykuA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02340___ykuA
# 2: RBAM_013760___ykuA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 712
# Identity: 517/712 (72.6%)
# Similarity: 618/712 (86.8%)
# Gaps: 8/712 ( 1.1%)
# Score: 2780.0
#
#
#=======================================
BSNT_02340___ 1 MTEIGREPKKKSKGNRAIRMNLFFLAVFVLFTALIFKLGVVQIVEGEQHE 50
|.|:.||||||:|..||:||||:||.||:||||||||||:||||||::|.
RBAM_013760__ 1 MAEVAREPKKKTKRYRALRMNLYFLVVFLLFTALIFKLGIVQIVEGDKHR 50
BSNT_02340___ 51 EDAEKSNAKTAYYPAPRGKMYDRNQKVAVDNQSVPEIVYVSTSSTKTEDK 100
:||||:||||||||.|||||||:..:||||||:||||||||||.|..:||
RBAM_013760__ 51 QDAEKANAKTAYYPTPRGKMYDKRNRVAVDNQAVPEIVYVSTSKTSAKDK 100
BSNT_02340___ 101 IKTAKRLASFIHIDTEFLKERDLRDYWIAAHPKKAAALLKESESNLKGDQ 150
:||||.||:.|||||||:|:|::.|||:|||||||..|:|:||::||..:
RBAM_013760__ 101 LKTAKNLAALIHIDTEFMKDRNIIDYWLAAHPKKAEKLMKDSENSLKSQE 150
BSNT_02340___ 151 AYKLQIERVPDQELKAIQQDDEEMETAAIYTRFSSGNAYEPQIVKAMNPN 200
.||.||||||.||:.||:::.:|:|.|||||||||||||:||:||:|:||
RBAM_013760__ 151 VYKRQIERVPKQEIDAIKKNKKELEIAAIYTRFSSGNAYQPQVVKSMDPN 200
BSNT_02340___ 201 KSNSNGKNGALLDEKKNSSQRPKNDLTYDEISIVSEHLEELPGIDIVNDW 250
|.|.||.:|:||||.:|:.|:||:||||:|:|:|||||:||||||::|||
RBAM_013760__ 201 KLNGNGNSGSLLDEHENNKQKPKSDLTYEEVSVVSEHLKELPGIDVINDW 250
BSNT_02340___ 251 TRKYPYDKTLYSVFGGVTTPDQGLLSDRKDFYLTRGYANNDRVGKSYLEY 300
||||||||||||:|||||||:||||.:|||:|:||||:.||||||||:||
RBAM_013760__ 251 TRKYPYDKTLYSLFGGVTTPEQGLLGERKDYYVTRGYSLNDRVGKSYIEY 300
BSNT_02340___ 301 QYEEYLNSHKEKVEYVEDNKGNVVSQKTIDKGSRGYDLQLSFDMELQAKV 350
|||:|||:|||||||||::||.|||||.:|:||||||||||.|||||:||
RBAM_013760__ 301 QYEDYLNAHKEKVEYVENSKGEVVSQKPVDEGSRGYDLQLSLDMELQSKV 350
BSNT_02340___ 351 EKIIEEEVRNSRARGNYMLDRAFAVMMDPNNGDILSMAGKKIDLKTNKIE 400
||:||:|:|.|||.||:|:||.||||||||||||||||||:|||:|||.:
RBAM_013760__ 351 EKVIEKELRRSRAAGNFMVDRGFAVMMDPNNGDILSMAGKRIDLETNKTQ 400
BSNT_02340___ 401 DYAIGAFTTQYEMGSAVKGATVLAGYQDGIPHYKYFVDTPLYLAGYGNKP 450
|:|||||||||||||:|||||||||||.|:||||.|||.||... ....
RBAM_013760__ 401 DFAIGAFTTQYEMGSSVKGATVLAGYQSGLPHYKTFVDAPLKFK--DGTE 448
BSNT_02340___ 451 KKSYMNMGTINELTALQKSSNVYMFNVAMHIAGVTYKPHGPLPADQKDLN 500
|.|:..||||.||||||:|||:|||:|||||||:||.|||.|||...|:.
RBAM_013760__ 449 KHSWTQMGTITELTALQRSSNIYMFHVAMHIAGITYVPHGMLPAGLDDIK 498
BSNT_02340___ 501 KMRNYYSQFGLGVKTGIDLPQESAGMQTTPDAVGGLILDLAIGQYDTYTP 550
||||||:||||||||||||||||||||:.|..||||:||.||||:|||||
RBAM_013760__ 499 KMRNYYAQFGLGVKTGIDLPQESAGMQSNPQMVGGLLLDFAIGQFDTYTP 548
BSNT_02340___ 551 LQMAQYISSIANGGYRIQPRIVTSVHEPSKKEGLGKTIEQRKPNILNKIN 600
||||||||:|||||||:|||||||:|||..|..:||.||||...||||:|
RBAM_013760__ 549 LQMAQYISAIANGGYRVQPRIVTSIHEPDSKNKIGKAIEQRDIKILNKVN 598
BSNT_02340___ 601 NSESDIQQVKTGMKLVTTS--GTAKNTFT---EDVSGKTGTAETFYYGTN 645
||.||..||..||||||:| |||.:||. .|||||||||:|.|||||
RBAM_013760__ 599 NSPSDFDQVHKGMKLVTSSPQGTAYSTFQGSGADVSGKTGTAQTHYYGTN 648
BSNT_02340___ 646 RNWWGKKTYNLTFVGYYPSKNPKVAFSVVVPSVNDD-DKINKIIAKRAIH 694
:||||::||||||||||||::|:||||||||||.|| |.|:|.|||.|:.
RBAM_013760__ 649 KNWWGQETYNLTFVGYYPSEHPRVAFSVVVPSVRDDKDHISKNIAKGAVD 698
BSNT_02340___ 695 AYAELEKKHSKK 706
||.|||||::||
RBAM_013760__ 699 AYKELEKKYNKK 710
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