Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02337 and RBAM_013720

See DNA alignment / Visit BSNT_02337 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:02
# Commandline: needle
#    -asequence pep-align/BSNT_02337___ykwC.1.9828.seq
#    -bsequence pep-align/RBAM_013720___ykwC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02337___ykwC-RBAM_013720___ykwC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02337___ykwC-RBAM_013720___ykwC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02337___ykwC
# 2: RBAM_013720___ykwC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     245/288 (85.1%)
# Similarity:   272/288 (94.4%)
# Gaps:           0/288 ( 0.0%)
# Score: 1295.0
# 
#
#=======================================

BSNT_02337___      1 MKKTIGFIGLGVMGKSMASHILNDGHPVLVYTRTKEKAESILQKGAIWKD     50
                     |.||:|||||||||.|||||||..|:|||||||||:|||.||.|||:|::
RBAM_013720__      1 MNKTVGFIGLGVMGNSMASHILEAGYPVLVYTRTKQKAEEILNKGAVWQE     50

BSNT_02337___     51 TVKDLSKEADVIITMVGYPSDVEEVYFGSNGIIENAKEGAYLIDMTTSKP    100
                     ||||||::||:|||||||||||||:|.|.|||:.:|||||::||||||||
RBAM_013720__     51 TVKDLSEKADIIITMVGYPSDVEEIYLGENGILRHAKEGAFVIDMTTSKP    100

BSNT_02337___    101 SLAKKIAEAAKEKALFALDAPVSGGDVGAQNGTLAIMVGGEKEAFEACMP    150
                     ||||||||.||||::.||||||||||:||:|||||||.||||||||||:|
RBAM_013720__    101 SLAKKIAEKAKEKSIHALDAPVSGGDIGARNGTLAIMAGGEKEAFEACLP    150

BSNT_02337___    151 IFSLMGENIQYQGSAGSGQHTKMCNQIAIAAGMIGVAEAMAYAQKSGLEP    200
                     :||:|||||||||.|||||||||||||||||||:|||||||||:||||.|
RBAM_013720__    151 LFSVMGENIQYQGPAGSGQHTKMCNQIAIAAGMVGVAEAMAYAEKSGLNP    200

BSNT_02337___    201 ENVLKSITTGAAGSWSLSNLAPRMLQGNFEPGFYVKHFIKDMGIALEEAE    250
                     |.|||||||||||||||||||||||:|:|.||||||||||||||||||||
RBAM_013720__    201 EQVLKSITTGAAGSWSLSNLAPRMLKGDFAPGFYVKHFIKDMGIALEEAE    250

BSNT_02337___    251 LMGEEMPGLSLAKSLYDKLAAQGEENSGTQSIYKLWVK    288
                     |||||||||:|||||||||:||||||||||||||||||
RBAM_013720__    251 LMGEEMPGLALAKSLYDKLSAQGEENSGTQSIYKLWVK    288


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