Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02326 and RBAM_013640

See DNA alignment / Visit BSNT_02326 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:01
# Commandline: needle
#    -asequence pep-align/BSNT_02326___ykvZ.1.9828.seq
#    -bsequence pep-align/RBAM_013640___ykvZ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02326___ykvZ-RBAM_013640___ykvZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02326___ykvZ-RBAM_013640___ykvZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02326___ykvZ
# 2: RBAM_013640___ykvZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     230/321 (71.7%)
# Similarity:   277/321 (86.3%)
# Gaps:           0/321 ( 0.0%)
# Score: 1182.0
# 
#
#=======================================

BSNT_02326___      1 MANIKDIAEKAGVSVTTVSRVINNHPYVSEDKRKRVFEAMESLEYTRNIH     50
                     ||.|:|||..|||||||||||:|:|||||:|||:||.:||:||.||||||
RBAM_013640__      1 MATIRDIAGAAGVSVTTVSRVLNDHPYVSKDKRERVKKAMQSLGYTRNIH     50

BSNT_02326___     51 AVHLSKGFSNMIGVVLPTVNLPYFAELIAGIADAAAESGVHLSLFQTNYE    100
                     |||||||||:|||||||:|||||||:|:||||:||..|||||||:||:|:
RBAM_013640__     51 AVHLSKGFSDMIGVVLPSVNLPYFADLVAGIAEAAEASGVHLSLYQTDYQ    100

BSNT_02326___    101 VQKEIFALSQLKQRQVDGLIFCSKALADEKLMEWEGPILLCQNSDNARFP    150
                     .|||.||||||::|||||||.||||:.||.|:..:.|::|||.:|.|...
RBAM_013640__    101 QQKERFALSQLQERQVDGLIICSKAIPDEHLLIVKEPLILCQYTDAAGLS    150

BSNT_02326___    151 TISIPHQEAFRNGLDYLIAKGHKKIAICLARKKGMNSHFRIKAYKEALEE    200
                     :||.||:||||:||||||.|||:||||.||||||.||..||.||||||::
RBAM_013640__    151 SISNPHREAFRHGLDYLIEKGHRKIAISLARKKGKNSQVRIAAYKEALKK    200

BSNT_02326___    201 IGEAFREDWVIEKAITINDGKALFHKWKTWKEKPTAIFVANDQVSAGLFL    250
                     ||:.:||:.|:|||:|:.||||||||||:|.:||||:|.|||||||||:|
RBAM_013640__    201 IGQPYREELVVEKALTLLDGKALFHKWKSWDDKPTALFAANDQVSAGLYL    250

BSNT_02326___    251 EAKNQRVSVPDELAILSVDNHEISQALGITTIDIQTREMGKQAFAILEKR    300
                     |||.....:|:||||||:|||:||:.|||:||||||:|||||||.:||.|
RBAM_013640__    251 EAKANGTRIPEELAILSIDNHDISKMLGISTIDIQTKEMGKQAFHMLENR    300

BSNT_02326___    301 IQGQPIERKVLDYRLIERSTV    321
                     |.|.|..||||||||||||||
RBAM_013640__    301 ISGGPPARKVLDYRLIERSTV    321


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