Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02326 and RBAM_013640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:01
# Commandline: needle
# -asequence dna-align/BSNT_02326___ykvZ.1.9828.seq
# -bsequence dna-align/RBAM_013640___ykvZ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02326___ykvZ-RBAM_013640___ykvZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02326___ykvZ-RBAM_013640___ykvZ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02326___ykvZ
# 2: RBAM_013640___ykvZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 991
# Identity: 694/991 (70.0%)
# Similarity: 694/991 (70.0%)
# Gaps: 50/991 ( 5.0%)
# Score: 2238.5
#
#
#=======================================
BSNT_02326___ 1 ATGGCTAATATTAAAGACATTGCAGAAAAAGCCGGTGTCTCTGTTACAAC 50
|||||||..||.|.|||||||||.|.....|||||.||.|||||||||||
RBAM_013640__ 1 ATGGCTACGATCAGAGACATTGCCGGCGCTGCCGGGGTTTCTGTTACAAC 50
BSNT_02326___ 51 GGTTTCCCGAGTCATAAACAATCATCCATACGTCAGTGAAGACAAACGAA 100
|||.||..||||..|||||.|||||||.||.||.|||.|.||||||.||.
RBAM_013640__ 51 GGTATCAAGAGTTTTAAACGATCATCCTTATGTAAGTAAGGACAAAAGAG 100
BSNT_02326___ 101 AAAGAGTGTTTGAGGCAATGGAATC-ATTGGAGTACACGAGAAATATTCA 149
||||||||....|.||.|||.|||| .|.||| ||.|||.|.||.|||||
RBAM_013640__ 101 AAAGAGTGAAAAAAGCGATGCAATCGCTCGGA-TATACGCGCAACATTCA 149
BSNT_02326___ 150 CGCTGTACATTTGTCGAAAGGATTTTCAAACATGATTGGTGTTGT-CTTG 198
.|||||||||||.||.|||||.|||||..|.|||||.||.||||| |||
RBAM_013640__ 150 TGCTGTACATTTATCCAAAGGTTTTTCCGATATGATCGGCGTTGTGCTT- 198
BSNT_02326___ 199 CCAACGGTTAATCTGCCATATTTTGCAGAGCTGATTGCAGGAATAGCCGA 248
||..||||.|||||.||.||||||||.||.||..|||||||.||.|||||
RBAM_013640__ 199 CCGTCGGTGAATCTTCCGTATTTTGCGGACCTTGTTGCAGGTATTGCCGA 248
BSNT_02326___ 249 TGCAGCCGCGGAATCCGGGGTTCACCTCTCTTTATTCCAAACAAACTATG 298
.||.||||..|..||.||.||.||.||.|||||||.|||.|||.|.|||.
RBAM_013640__ 249 GGCTGCCGAAGCGTCAGGCGTGCATCTTTCTTTATACCAGACAGATTATC 298
BSNT_02326___ 299 AGGTACAAAAAGAAATCTTTGCGCTGTCCCAATTAAAGCAGCGCCAGGTT 348
||...|||||||||...|||||..|.||.||.|||.||.|||||||.||.
RBAM_013640__ 299 AGCAGCAAAAAGAACGTTTTGCCTTATCACAGTTACAGGAGCGCCAAGTG 348
BSNT_02326___ 349 GACGGCCTGATTTTTTGCTCAAAGGCGCTTGCTGATGAGAAAC------T 392
||||||||||||.|.|||||.||.||..||.|||||||..|.| |
RBAM_013640__ 349 GACGGCCTGATTATCTGCTCCAAAGCAATTCCTGATGAACATCTGCTTAT 398
BSNT_02326___ 393 CATGGAATGGGAGGGCCCGATTTTGCTTTGCCAGAATTCAGATAATGC-C 441
|.||.|| |..|||.|..|.||.||||||.|..|.|||...|| .
RBAM_013640__ 399 CGTGAAA------GAACCGCTCATCCTCTGCCAGTACACTGATGCGGCAG 442
BSNT_02326___ 442 CGCTTCCCAACCATCAGTATTCCTCACCAAGAAGCATTTCGGAACGGCTT 491
.||||.|| .|||||||||.|||.||.|..||||||||||||.||||..|
RBAM_013640__ 443 GGCTTTCC-TCCATCAGTAATCCGCATCGGGAAGCATTTCGGCACGGTCT 491
BSNT_02326___ 492 GGACTATTTAATTGCCAAAGGGCACAAAAAAATAGCCATCTGTTTGGCAA 541
|||.|||.|.||.|..|||||.|||...||||||||.|||.|..||||.|
RBAM_013640__ 492 GGATTATCTGATAGAAAAAGGACACCGGAAAATAGCGATCAGCCTGGCCA 541
BSNT_02326___ 542 GAAAAAAAGGCATGAACAGTCATTTTCGAATCAAAGCCTACAAAGAGGCA 591
|||||||.||.|..||||||||..|.||.||....||.|||||||||||.
RBAM_013640__ 542 GAAAAAAGGGAAAAAACAGTCAAGTACGCATTGCCGCATACAAAGAGGCG 591
BSNT_02326___ 592 TTGGAAG-AGATCGGCGAGGCATTTC-GTGAAGA-CTGGGTAATTGAGAA 638
.| .||| ||||||| |..||.||.| |.||||| || |||..|.||.||
RBAM_013640__ 592 CT-CAAGAAGATCGG-GCAGCCTTACAGGGAAGAGCT-GGTTGTGGAAAA 638
BSNT_02326___ 639 AGCGATTACAATCAATGATGGGAAGGCGCTTTTTCATAAATGGAAAACGT 688
.|||.|.||..|...|||.|||||.||.|||||||||||||||||.|..|
RBAM_013640__ 639 GGCGCTGACGCTGCTTGACGGGAAAGCCCTTTTTCATAAATGGAAGAGCT 688
BSNT_02326___ 689 GGAAGGAAAAGCCGACGGCTATTTTTGTTGCCAATGACCAAGTCTCAGCA 738
||.|.||.||.|||||.||..|.||||..||.|||||.|||||.||.|||
RBAM_013640__ 689 GGGATGACAAACCGACTGCGCTGTTTGCGGCGAATGATCAAGTATCCGCA 738
BSNT_02326___ 739 GGGCTTTTTCTTGAAGCAAAGAACCA--------GCGGGTGTCAGTACCG 780
||.||||..||||||||.||| .|| ||| || |.|||
RBAM_013640__ 739 GGTCTTTACCTTGAAGCCAAG--GCAAATGGGACGCG-----CA-TCCCG 780
BSNT_02326___ 781 GATGAGCTTGCAATCTTAAGCGTTGATAACCACGAAATCAGCCAAG-CGC 829
||.||||||||.||.||.|||.|.||.||.||.||.||||| |||| .|.
RBAM_013640__ 781 GAAGAGCTTGCGATTTTGAGCATCGACAATCATGATATCAG-CAAGATGT 829
BSNT_02326___ 830 TTGGAATCACAACGATCGATATTCAGACAAGGGAAATGGGAAAGCAGGCA 879
|.||.||..|.||.||.|||||.||.||||..|||||||||||||||||.
RBAM_013640__ 830 TAGGTATTTCCACAATAGATATACAAACAAAAGAAATGGGAAAGCAGGCT 879
BSNT_02326___ 880 TTTGCCATACTGGAAAAAAGAATTCA----AGGACAGCCGATTGAAAGGA 925
|||..|||.||.||.||..|.| ||| .||.|..||| |.|||||
RBAM_013640__ 880 TTTCACATGCTTGAGAACCGGA-TCAGCGGCGGGCCTCCG---GCAAGGA 925
BSNT_02326___ 926 AAGTTCTGGATTACCGTCTCATCGAAAGATCGACTGTTTAG 966
|||||||.||||||||.||.||.|||.||||.||.||.||.
RBAM_013640__ 926 AAGTTCTTGATTACCGCCTTATTGAACGATCAACCGTCTAA 966
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