Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02320 and RBAM_013620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:01
# Commandline: needle
# -asequence pep-align/BSNT_02320___ykvW.1.9828.seq
# -bsequence pep-align/RBAM_013620___ykvW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02320___ykvW-RBAM_013620___ykvW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02320___ykvW-RBAM_013620___ykvW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02320___ykvW
# 2: RBAM_013620___ykvW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 637
# Identity: 506/637 (79.4%)
# Similarity: 562/637 (88.2%)
# Gaps: 0/637 ( 0.0%)
# Score: 2559.0
#
#
#=======================================
BSNT_02320___ 1 MNEQVIVQRDPHEPLKTDKREKNWAQHAELIAALVSGALILAGWLLSGYQ 50
|||||:.|....:.::.::..|.|.||||||||||||.||||.|..:..:
RBAM_013620__ 1 MNEQVMTQTHSQQHIQEERAGKKWLQHAELIAALVSGVLILAAWFFTETK 50
BSNT_02320___ 51 VLSIILFLLAFVIGGFAKAKEGIEETLESKTLNVELLMIFAAVGSALIGY 100
.||:.|::|||:||||||||||||:|:|:|.|||||||||||||||||||
RBAM_013620__ 51 GLSVTLYILAFLIGGFAKAKEGIEDTIETKALNVELLMIFAAVGSALIGY 100
BSNT_02320___ 101 WAEGAILIFIFSLSGALETYTMNKSSRDLTSLMQLEPEEATLMVNGETKR 150
|||||:|||||||||||||||||||||||||||:||||||||:.:|..||
RBAM_013620__ 101 WAEGAVLIFIFSLSGALETYTMNKSSRDLTSLMKLEPEEATLLADGREKR 150
BSNT_02320___ 151 VPVSDLQAGDMIVIKPGERVAADGIIESGSTSLDESALTGESMPVEKNRG 200
||.::|:.|||||||||||||||||||||.|||||||||||:||.||..|
RBAM_013620__ 151 VPAAELKIGDMIVIKPGERVAADGIIESGVTSLDESALTGEAMPAEKTAG 200
BSNT_02320___ 201 DAVFTGTVNRNGSLTVRVTKANEDSLFRKIIKLVESAQNSVSPAQAFIER 250
|:|||||||.||||||||||.||.|||||||:||||||||||||||||||
RBAM_013620__ 201 DSVFTGTVNGNGSLTVRVTKTNEQSLFRKIIRLVESAQNSVSPAQAFIER 250
BSNT_02320___ 251 FENAYVKGVLIAVALLLFVPHFALGWSWSETFYRAMVFMVVASPCALVAS 300
||:.||||||:|||||||:|||||||||||||||||||||||||||||||
RBAM_013620__ 251 FESVYVKGVLLAVALLLFIPHFALGWSWSETFYRAMVFMVVASPCALVAS 300
BSNT_02320___ 301 IMPAALSLISNGARNGMLVKGSVFLEQLGSVQMIAFDKTGTVTKGQPAVE 350
||||||||||||||||:||||||||||||||:|||||||||||||||||.
RBAM_013620__ 301 IMPAALSLISNGARNGLLVKGSVFLEQLGSVRMIAFDKTGTVTKGQPAVA 350
BSNT_02320___ 351 TIRIAEGFSEAEVLEAVYAIEMQSSHPLAQAITAYAESRGVNQSGYISIE 400
..:.||..||.|:::||||:|.|||||||:||..:|||||...:|::||:
RBAM_013620__ 351 AFQAAEHVSEDEIMQAVYAMEKQSSHPLAKAIAEFAESRGAAPAGHLSID 400
BSNT_02320___ 401 ETSGFGVMAEVSGAKWKVGKAGFIGEEMAAQFLKQTASDVIQSGHTIVFV 450
|||||||.||:.|.||.||||||.||:.|..||:.:..::...|.|:|||
RBAM_013620__ 401 ETSGFGVQAEIEGVKWMVGKAGFAGEDAADAFLQTSGKELKDKGFTLVFV 450
BSNT_02320___ 451 KKDDQIAGCIALKDQIRPEAKEVMEELNRLGIKTAMLTGDHEDTAQAIAK 500
||||:||||.|||||||||||.||.||..|||||||||||..:||.||||
RBAM_013620__ 451 KKDDRIAGCFALKDQIRPEAKAVMAELESLGIKTAMLTGDQSETAAAIAK 500
BSNT_02320___ 501 EAGMTTVVAECLPDQKVNEIKRLKEEFGTIAMVGDGINDAPALKAADVGI 550
|||||||||:||||||..|:|:|||.:|||||||||||||||||.|||||
RBAM_013620__ 501 EAGMTTVVADCLPDQKAKEVKKLKETYGTIAMVGDGINDAPALKTADVGI 550
BSNT_02320___ 551 AMGGGTDVALETADMVLMKNDLKKLVNMCRLSRKMNRIIKQNIVFSLAVI 600
||||||||||||||:|||||||.|||.||||||||||||||||||||:||
RBAM_013620__ 551 AMGGGTDVALETADLVLMKNDLHKLVKMCRLSRKMNRIIKQNIVFSLSVI 600
BSNT_02320___ 601 CLLICANFLQVMELPFGVIGHEGSTILVILNGLRLLK 637
|||||||||||||||||||||||||||||||||||||
RBAM_013620__ 601 CLLICANFLQVMELPFGVIGHEGSTILVILNGLRLLK 637
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