Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02316 and RBAM_013610

See DNA alignment / Visit BSNT_02316 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence pep-align/BSNT_02316___ykvV.1.9828.seq
#    -bsequence pep-align/RBAM_013610___stoA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02316___ykvV-RBAM_013610___stoA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02316___ykvV-RBAM_013610___stoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02316___ykvV
# 2: RBAM_013610___stoA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:     111/165 (67.3%)
# Similarity:   135/165 (81.8%)
# Gaps:           1/165 ( 0.6%)
# Score: 601.0
# 
#
#=======================================

BSNT_02316___      1 MLTKRLLTIYIMLLGLIAWFPCAAQAEEKQPAVPAVFLMKTIEGEDISIP     50
                     |...||:...::|:....|.|.|..:.||| |||||||||||||::||||
RBAM_013610__      1 MHKNRLIVCAVLLIAAAVWMPEAKASSEKQ-AVPAVFLMKTIEGDEISIP     49

BSNT_02316___     51 NKGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQN    100
                     ||||||||||||||||||||||||||::|:.|.|..|.||||||:|:|:|
RBAM_013610__     50 NKGQKTILHFWTSWCPPCKKELPQFQTYYEQHQSGDVSLVTVNLMNAERN     99

BSNT_02316___    101 QQVVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTK    150
                     :..|::|:..:.||||||||:||||||||.::||||||||||||||||..
RBAM_013610__    100 KNSVQNFVSQHHLTFPIVLDTKGELMKEYDVMTIPTSFLLNEKGEIEKKI    149

BSNT_02316___    151 IGPMTAEQLKEWTEE    165
                     :|||||.|||||:|:
RBAM_013610__    150 VGPMTASQLKEWSEK    164


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