Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02310 and RBAM_013560

See DNA alignment / Visit BSNT_02310 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence pep-align/BSNT_02310___ykvR.1.9828.seq
#    -bsequence pep-align/RBAM_013560___ykvR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02310___ykvR-RBAM_013560___ykvR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02310___ykvR-RBAM_013560___ykvR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02310___ykvR
# 2: RBAM_013560___ykvR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 97
# Identity:      52/97 (53.6%)
# Similarity:    68/97 (70.1%)
# Gaps:           7/97 ( 7.2%)
# Score: 259.0
# 
#
#=======================================

BSNT_02310___      1 MKTLRLNNVTLEMAAYQEES-EPKRKIAFTLNVTSETYHDIAVLLYEKTF     49
                     |:.|.||.|.|:|...:|.: :..|.|:|.|.||||||||||||||||||
RBAM_013560__      1 MEPLELNGVRLKMYDCKESAGKNGRMISFVLKVTSETYHDIAVLLYEKTF     50

BSNT_02310___     50 NVEVPERGLAFRGKMTNYSTSLTNLYEPGAVSEFYIEITEIDKNADS     96
                     :::.|||||.||||:||:.||:||||......:|::|:|||      
RBAM_013560__     51 DIKAPERGLEFRGKITNHYTSVTNLYNKDETGDFFVEMTEI------     91


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