Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02309 and RBAM_013520

See DNA alignment / Visit BSNT_02309 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence pep-align/BSNT_02309___ykvM.1.9828.seq
#    -bsequence pep-align/RBAM_013520___ykvM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02309___ykvM-RBAM_013520___ykvM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02309___ykvM-RBAM_013520___ykvM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02309___ykvM
# 2: RBAM_013520___ykvM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:     159/165 (96.4%)
# Similarity:   163/165 (98.8%)
# Gaps:           1/165 ( 0.6%)
# Score: 879.0
# 
#
#=======================================

BSNT_02309___      1 MTTRKESELEGVTLLGNQGTNYLFEYAPDVLESFPNKHVNRDYFVKFNCP     50
                      .||||||||||||||||||||||||||:|||||||||||||||||||||
RBAM_013520__      1 -MTRKESELEGVTLLGNQGTNYLFEYAPEVLESFPNKHVNRDYFVKFNCP     49

BSNT_02309___     51 EFTSLCPKTGQPDFATIYISYIPDEKMVESKSLKLYLFSFRNHGDFHEDC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_013520__     50 EFTSLCPKTGQPDFATIYISYIPDEKMVESKSLKLYLFSFRNHGDFHEDC     99

BSNT_02309___    101 MNIIMNDLIELMDPRYIEVWGKFTPRGGISIDPYTNYGKPGTKYEKMAEY    150
                     ||||||||||||||||||||||||||||||||||||||:||||||||||:
RBAM_013520__    100 MNIIMNDLIELMDPRYIEVWGKFTPRGGISIDPYTNYGRPGTKYEKMAEH    149

BSNT_02309___    151 RMMNHDLYPETIDNR    165
                     ||||||:||||||||
RBAM_013520__    150 RMMNHDMYPETIDNR    164


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.