Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02307 and RBAM_013500

See DNA alignment / Visit BSNT_02307 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence pep-align/BSNT_02307___ykvK.1.9828.seq
#    -bsequence pep-align/RBAM_013500___ykvK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02307___ykvK-RBAM_013500___ykvK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02307___ykvK-RBAM_013500___ykvK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02307___ykvK
# 2: RBAM_013500___ykvK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:     133/147 (90.5%)
# Similarity:   139/147 (94.6%)
# Gaps:           1/147 ( 0.7%)
# Score: 713.0
# 
#
#=======================================

BSNT_02307___      1 MLSQIYPQAQHPYSFELNKDMHISAAHFIPRESAGACSRVHGHTYTVNIT     50
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
RBAM_013500__      1 MLSQIYPQVQHPYSFELNKDMHISAAHFIPRESAGACSRVHGHTYTVNIT     50

BSNT_02307___     51 VAGDELDDSGFLVNFSVLKKLVHGNYDHTLLNDHEDFS-QDDRYSLPTTE     99
                     ||||||||||||||||||||||||.|||||||||::|| .||||||||||
RBAM_013500__     51 VAGDELDDSGFLVNFSVLKKLVHGAYDHTLLNDHDEFSADDDRYSLPTTE    100

BSNT_02307___    100 VVAKTIYDNVQAYLDTLENKPTCVQVFVRETPTSYCVYRPKKGGLNG    146
                     ||||||||.||:||:||||:|.|||:|||||||||||||||||..||
RBAM_013500__    101 VVAKTIYDKVQSYLETLENQPVCVQIFVRETPTSYCVYRPKKGDRNG    147


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