Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02307 and RBAM_013500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_02307___ykvK.1.9828.seq
# -bsequence dna-align/RBAM_013500___ykvK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02307___ykvK-RBAM_013500___ykvK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02307___ykvK-RBAM_013500___ykvK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02307___ykvK
# 2: RBAM_013500___ykvK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity: 353/444 (79.5%)
# Similarity: 353/444 (79.5%)
# Gaps: 3/444 ( 0.7%)
# Score: 1402.0
#
#
#=======================================
BSNT_02307___ 1 TTGTTATCTCAAATTTATCCGCAGGCCCAGCATCCTTATTCGTTTGAACT 50
|||.|.|||||||||||.|||||||..||||||||||||||||||||..|
RBAM_013500__ 1 TTGCTTTCTCAAATTTACCCGCAGGTTCAGCATCCTTATTCGTTTGAGTT 50
BSNT_02307___ 51 GAATAAGGACATGCATATCTCAGCCGCTCATTTTATCCCTCGGGAAAGTG 100
|||||||||||||||.|||||||||||.||.|||||.||.||.|||||.|
RBAM_013500__ 51 GAATAAGGACATGCACATCTCAGCCGCGCACTTTATTCCCCGCGAAAGCG 100
BSNT_02307___ 101 CGGGAGCGTGCAGCAGGGTTCACGGACATACGTATACCGTAAATATAACC 150
|.||||||||||||||.||.|||||.||.||||||||.||||||||.||.
RBAM_013500__ 101 CCGGAGCGTGCAGCAGAGTCCACGGGCACACGTATACAGTAAATATTACA 150
BSNT_02307___ 151 GTTGCCGGCGACGAACTTGACGATTCAGGCTTTCTTGTCAATTTCAGCGT 200
|||||.||.||.|||||.||||||||.||||||||.||.|||||||||||
RBAM_013500__ 151 GTTGCGGGGGATGAACTGGACGATTCGGGCTTTCTCGTGAATTTCAGCGT 200
BSNT_02307___ 201 ACTCAAAAAACTGGTGCACGGAAACTATGATCACACGCTATTAAATGATC 250
.||.||.|||.||||||||||....|||||.||.||..|..|.|||||.|
RBAM_013500__ 201 GCTGAAGAAATTGGTGCACGGCGCTTATGACCATACATTGCTGAATGACC 250
BSNT_02307___ 251 ATGAAGATTTTT---CTCAGGACGACCGGTATTCGCTGCCGACAACTGAA 297
||||.||.|||| ||.|.||.|||.|.|||||.||||||||.||.||.
RBAM_013500__ 251 ATGACGAGTTTTCTGCTGATGATGACAGATATTCACTGCCGACGACCGAG 300
BSNT_02307___ 298 GTCGTGGCGAAAACGATTTATGACAACGTACAGGCTTATTTAGACACTTT 347
||||||||.|||||||||||.||.||.||.|||.|.||..|.||.||..|
RBAM_013500__ 301 GTCGTGGCCAAAACGATTTACGATAAGGTGCAGTCCTACCTCGAAACACT 350
BSNT_02307___ 348 GGAGAATAAGCCGACCTGTGTACAGGTGTTTGTCCGTGAAACACCGACAA 397
|||||||.|||||..|||.||.|||.|.||||||.|.|||||.|||||||
RBAM_013500__ 351 GGAGAATCAGCCGGTCTGCGTGCAGATTTTTGTCAGGGAAACCCCGACAA 400
BSNT_02307___ 398 GCTACTGTGTCTACCGTCCGAAGAAGGGTGGTTTGAATGGCTAA 441
||||.||.||.|||||.|||||.||.||||.|..||||||||||
RBAM_013500__ 401 GCTATTGCGTATACCGCCCGAAAAAAGGTGATAGGAATGGCTAA 444
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