Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02304 and RBAM_013470
See
DNA alignment /
Visit
BSNT_02304 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence pep-align/BSNT_02304___ykvI.1.9828.seq
# -bsequence pep-align/RBAM_013470___ykvI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02304___ykvI-RBAM_013470___ykvI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02304___ykvI-RBAM_013470___ykvI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02304___ykvI
# 2: RBAM_013470___ykvI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity: 260/347 (74.9%)
# Similarity: 303/347 (87.3%)
# Gaps: 2/347 ( 0.6%)
# Score: 1354.0
#
#
#=======================================
BSNT_02304___ 1 MEQSKGSASQLAFVYVGTVVGAGFATGREIVEFFLKFGWFGLFGILVSGG 50
|.|:|||||||||||||||||||||||||||||||||||.|||||:|||.
RBAM_013470__ 1 MGQTKGSASQLAFVYVGTVVGAGFATGREIVEFFLKFGWIGLFGIVVSGL 50
BSNT_02304___ 51 MFTFLGAKLMIISKRINAKSYQEMNIFLFGAAAGRIINVFMLFVLLGVTS 100
|||:||||:|||||||:|.||||:|.:|||.:.||.:|:||:|:||||||
RBAM_013470__ 51 MFTYLGAKIMIISKRIHAASYQELNTYLFGKSIGRAVNMFMMFILLGVTS 100
BSNT_02304___ 101 VMLSGAGALFEEQLGMSAQIGMLITIGLSLIVMTRGVKGIFGVNVFVVPL 150
||||||||||.||||.|||.|:|:||.||..|||.||||:||||:.||||
RBAM_013470__ 101 VMLSGAGALFHEQLGWSAQAGILLTIVLSFAVMTSGVKGVFGVNILVVPL 150
BSNT_02304___ 151 LILFSMIVVADSFIFSESRNAAQWVWPHRWDWLLSAFSYGALNLSLAQAV 200
||.||.||.||||:|:.:|||.:||||.:|:|||||.|||||||||||||
RBAM_013470__ 151 LISFSFIVTADSFVFTSTRNADEWVWPDKWNWLLSAVSYGALNLSLAQAV 200
BSNT_02304___ 201 LVPLANEMSSEKVIKKGALIGGTMLTIVLSGSFLSLSTLPDVFLYDIPMA 250
||||||||||||||::||..||.:||:||:.||||||.||||..:|||||
RBAM_013470__ 201 LVPLANEMSSEKVIRRGAYFGGVLLTLVLAASFLSLSVLPDVLEFDIPMA 250
BSNT_02304___ 251 QVVYLFARSVHLIYLLIIFGEVFTSVIGNLYGLEKQVQSFLPVKSKYIFA 300
||||.::||:|:|||.||||||||||||||||||||:.|||.:||.||:.
RBAM_013470__ 251 QVVYSYSRSLHIIYLFIIFGEVFTSVIGNLYGLEKQLNSFLHIKSTYIYG 300
BSNT_02304___ 301 AIMITAYITSQIGYGRLISTIYPLFGYVSLAFIGALLCKKAPRRRSL 347
.|:..|:|.||||||:||||:||:||||||||||||:|||.|:.:
RBAM_013470__ 301 GILAFAFIISQIGYGQLISTVYPVFGYVSLAFIGALICKKIPKEK-- 345
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.