Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02304 and RBAM_013470

See DNA alignment / Visit BSNT_02304 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence pep-align/BSNT_02304___ykvI.1.9828.seq
#    -bsequence pep-align/RBAM_013470___ykvI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02304___ykvI-RBAM_013470___ykvI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02304___ykvI-RBAM_013470___ykvI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02304___ykvI
# 2: RBAM_013470___ykvI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 347
# Identity:     260/347 (74.9%)
# Similarity:   303/347 (87.3%)
# Gaps:           2/347 ( 0.6%)
# Score: 1354.0
# 
#
#=======================================

BSNT_02304___      1 MEQSKGSASQLAFVYVGTVVGAGFATGREIVEFFLKFGWFGLFGILVSGG     50
                     |.|:|||||||||||||||||||||||||||||||||||.|||||:|||.
RBAM_013470__      1 MGQTKGSASQLAFVYVGTVVGAGFATGREIVEFFLKFGWIGLFGIVVSGL     50

BSNT_02304___     51 MFTFLGAKLMIISKRINAKSYQEMNIFLFGAAAGRIINVFMLFVLLGVTS    100
                     |||:||||:|||||||:|.||||:|.:|||.:.||.:|:||:|:||||||
RBAM_013470__     51 MFTYLGAKIMIISKRIHAASYQELNTYLFGKSIGRAVNMFMMFILLGVTS    100

BSNT_02304___    101 VMLSGAGALFEEQLGMSAQIGMLITIGLSLIVMTRGVKGIFGVNVFVVPL    150
                     ||||||||||.||||.|||.|:|:||.||..|||.||||:||||:.||||
RBAM_013470__    101 VMLSGAGALFHEQLGWSAQAGILLTIVLSFAVMTSGVKGVFGVNILVVPL    150

BSNT_02304___    151 LILFSMIVVADSFIFSESRNAAQWVWPHRWDWLLSAFSYGALNLSLAQAV    200
                     ||.||.||.||||:|:.:|||.:||||.:|:|||||.|||||||||||||
RBAM_013470__    151 LISFSFIVTADSFVFTSTRNADEWVWPDKWNWLLSAVSYGALNLSLAQAV    200

BSNT_02304___    201 LVPLANEMSSEKVIKKGALIGGTMLTIVLSGSFLSLSTLPDVFLYDIPMA    250
                     ||||||||||||||::||..||.:||:||:.||||||.||||..:|||||
RBAM_013470__    201 LVPLANEMSSEKVIRRGAYFGGVLLTLVLAASFLSLSVLPDVLEFDIPMA    250

BSNT_02304___    251 QVVYLFARSVHLIYLLIIFGEVFTSVIGNLYGLEKQVQSFLPVKSKYIFA    300
                     ||||.::||:|:|||.||||||||||||||||||||:.|||.:||.||:.
RBAM_013470__    251 QVVYSYSRSLHIIYLFIIFGEVFTSVIGNLYGLEKQLNSFLHIKSTYIYG    300

BSNT_02304___    301 AIMITAYITSQIGYGRLISTIYPLFGYVSLAFIGALLCKKAPRRRSL    347
                     .|:..|:|.||||||:||||:||:||||||||||||:|||.|:.:  
RBAM_013470__    301 GILAFAFIISQIGYGQLISTVYPVFGYVSLAFIGALICKKIPKEK--    345


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