Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02299 and RBAM_013450

See DNA alignment / Visit BSNT_02299 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence pep-align/BSNT_02299___motA.1.9828.seq
#    -bsequence pep-align/RBAM_013450___motA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02299___motA-RBAM_013450___motA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02299___motA-RBAM_013450___motA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02299___motA
# 2: RBAM_013450___motA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     245/271 (90.4%)
# Similarity:   258/271 (95.2%)
# Gaps:           2/271 ( 0.7%)
# Score: 1204.0
# 
#
#=======================================

BSNT_02299___      1 MDKTSLIGIILAFVALSVGMVLKGVSFSALANPAAILIIIAGTISAVVIA     50
                     |||||:||||||.:||||||||||||.||||||||||||:.||||||:||
RBAM_013450__      1 MDKTSIIGIILALIALSVGMVLKGVSLSALANPAAILIILFGTISAVIIA     50

BSNT_02299___     51 FPTKEIKKVPALFRVLFKENKQLTIEELIPMFSEWAQLARREGLLALEAS    100
                     ||.||||||||||:|||||||||||.:||||||:|||:||||||||||||
RBAM_013450__     51 FPGKEIKKVPALFKVLFKENKQLTIAQLIPMFSQWAQIARREGLLALEAS    100

BSNT_02299___    101 IEDVDDAFLKNGLSMAVDGQSAEFIRDIMTEEVEAMEDRHQAGAAIFTQA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_013450__    101 IEDVDDAFLKNGLSMAVDGQSAEFIRDIMTEEVEAMEDRHQAGAAIFTQA    150

BSNT_02299___    151 GTYAPTLGVLGAVIGLIAALSHMDNTDELGHAISAAFVATLLGIFTGYVL    200
                     |||||||||||||||||||||:|:||:.||||||||||||||||||||||
RBAM_013450__    151 GTYAPTLGVLGAVIGLIAALSNMNNTEALGHAISAAFVATLLGIFTGYVL    200

BSNT_02299___    201 WHPFANKLKRKSKQEVKLREVMIEGVLSVLEGQAPKVIEQKLLMYLPAKD    250
                     ||||||||||||||||||||:|||||||||||||||||||||||||||.:
RBAM_013450__    201 WHPFANKLKRKSKQEVKLREIMIEGVLSVLEGQAPKVIEQKLLMYLPANE    250

BSNT_02299___    251 RLKFAEQ-GEAQNGEKKEEA-    269
                     |.|.||| |||.|||||||. 
RBAM_013450__    251 RAKVAEQEGEANNGEKKEEEA    271


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