Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02299 and RBAM_013450

See Amino acid alignment / Visit BSNT_02299 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence dna-align/BSNT_02299___motA.1.9828.seq
#    -bsequence dna-align/RBAM_013450___motA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02299___motA-RBAM_013450___motA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02299___motA-RBAM_013450___motA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02299___motA
# 2: RBAM_013450___motA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 816
# Identity:     645/816 (79.0%)
# Similarity:   645/816 (79.0%)
# Gaps:           6/816 ( 0.7%)
# Score: 2543.0
# 
#
#=======================================

BSNT_02299___      1 ATGGATAAAACTTCGTTAATCGGTATTATTCTTGCTTTTGTGGCATTGAG     50
                     |||||||||||.|||.|.||||||||.||.||.||.||..|.||.||.||
RBAM_013450__      1 ATGGATAAAACATCGATTATCGGTATCATCCTCGCCTTGATTGCTTTAAG     50

BSNT_02299___     51 CGTCGGGATGGTTCTGAAAGGCGTCAGTTTCAGCGCCCTTGCAAACCCCG    100
                     |||.||.|||||.||||||||.|||||.||.|||||.||.||.|||||.|
RBAM_013450__     51 CGTGGGCATGGTGCTGAAAGGGGTCAGCTTAAGCGCACTCGCTAACCCGG    100

BSNT_02299___    101 CTGCCATTTTAATTATTATCGCCGGGACAATCTCAGCAGTCGTTATTGCG    150
                     |.||.|||.|.||||||.|...|||.||.||.||.||.||..|.||.||.
RBAM_013450__    101 CAGCTATTCTGATTATTTTGTTCGGTACGATTTCTGCGGTGATCATCGCA    150

BSNT_02299___    151 TTCCCAACAAAAGAAATTAAAAAAGTGCCTGCGCTGTTTCGAGTGTTATT    200
                     |||||...|||||||||.||||||||||||||.||.|||..||||.|.||
RBAM_013450__    151 TTCCCCGGAAAAGAAATCAAAAAAGTGCCTGCCCTTTTTAAAGTGCTGTT    200

BSNT_02299___    201 TAAGGAAAATAAACAGCTCACAATAGAGGAACTCATTCCTATGTTCTCTG    250
                     |||.|||||.||||||||.|||||.|.|.||.|.|||||||||||||||.
RBAM_013450__    201 TAAAGAAAACAAACAGCTGACAATTGCGCAATTAATTCCTATGTTCTCTC    250

BSNT_02299___    251 AATGGGCTCAGCTTGCACGCCGCGAAGGTCTGCTTGCTTTAGAAGCAAGC    300
                     |||||||.||..|.||..|.||.|||||||||||.||.||.|||||||||
RBAM_013450__    251 AATGGGCGCAAATCGCCAGACGTGAAGGTCTGCTCGCATTGGAAGCAAGC    300

BSNT_02299___    301 ATTGAGGATGTAGATGATGCTTTCTTGAAAAACGGGCTCAGCATGGCTGT    350
                     |||||.||.||.|||||.||.||.|||||||||||.||.||.|||||.||
RBAM_013450__    301 ATTGAAGACGTGGATGACGCATTTTTGAAAAACGGCCTGAGTATGGCGGT    350

BSNT_02299___    351 TGACGGGCAAAGCGCGGAATTTATCAGAGATATTATGACAGAGGAAGTCG    400
                     ||||||.||||||||.|||||||||||||||||||||||.||||||||.|
RBAM_013450__    351 TGACGGACAAAGCGCAGAATTTATCAGAGATATTATGACTGAGGAAGTTG    400

BSNT_02299___    401 AAGCAATGGAGGACAGGCACCAAGCCGGAGCCGCTATTTTTACACAAGCG    450
                     ||||.|||||.|||||.|||||.|||||.||.||.||.|||||||||||.
RBAM_013450__    401 AAGCGATGGAAGACAGACACCAGGCCGGCGCAGCCATCTTTACACAAGCC    450

BSNT_02299___    451 GGAACGTACGCCCCGACACTTGGAGTACTCGGTGCTGTAATCGGGCTGAT    500
                     ||.||.||.||.||||||||.||.||..|.|||||.||.|||||.||.||
RBAM_013450__    451 GGCACATATGCGCCGACACTCGGCGTTTTGGGTGCGGTCATCGGCCTTAT    500

BSNT_02299___    501 TGCCGCTCTCTCTCATATGGATAACACAGATGAGCTTGGACACGCCATCA    550
                     .||||||||.||..|.|||.|.||.||.||.|.|||.|||||.|||||||
RBAM_013450__    501 CGCCGCTCTTTCCAACATGAACAATACCGAGGCGCTCGGACATGCCATCA    550

BSNT_02299___    551 GTGCCGCCTTTGTTGCCACACTTCTCGGTATCTTTACAGGGTATGTGTTA    600
                     ||||.||.|||||.|||||.||||||||.||.||.|||||.|||||..||
RBAM_013450__    551 GTGCGGCGTTTGTCGCCACCCTTCTCGGGATTTTCACAGGATATGTACTA    600

BSNT_02299___    601 TGGCATCCTTTCGCAAATAAATTAAAACGAAAATCAAAACAAGAAGTAAA    650
                     ||||||||.|||||.||.|||.|.|||||.||||||||.||.|||||.||
RBAM_013450__    601 TGGCATCCCTTCGCCAACAAACTGAAACGCAAATCAAAGCAGGAAGTCAA    650

BSNT_02299___    651 ACTGCGTGAGGTCATGATTGAAGGTGTTTTATCCGTTTTAGAAGGACAAG    700
                     |||||||||..|||||||.|||||.|||.|.||.||..|.||||||||.|
RBAM_013450__    651 ACTGCGTGAAATCATGATCGAAGGCGTTCTGTCAGTGCTTGAAGGACAGG    700

BSNT_02299___    701 CACCGAAAGTCATCGAACAAAAGCTTTTAATGTATCTTCCTGCGAAGGAC    750
                     |.||||||||.|||||||||||.|||.|.|||||||||||||||||.||.
RBAM_013450__    701 CCCCGAAAGTGATCGAACAAAAACTTCTCATGTATCTTCCTGCGAATGAA    750

BSNT_02299___    751 CGCTTGAAATTTGCAGAAC---AAGGAGAGGCGCAAAATGGCGAGAAAA-    796
                     |||...|||.|.||.||||   ||||||||||..|.||||||||||||| 
RBAM_013450__    751 CGCGCAAAAGTCGCTGAACAAGAAGGAGAGGCAAACAATGGCGAGAAAAA    800

BSNT_02299___    797 --AAGAAGAAGCATGA    810
                       ||||||||||||||
RBAM_013450__    801 AGAAGAAGAAGCATGA    816


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