Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02296 and RBAM_013430

See DNA alignment / Visit BSNT_02296 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence pep-align/BSNT_02296___ykvE.1.9828.seq
#    -bsequence pep-align/RBAM_013430___ykvE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02296___ykvE-RBAM_013430___ykvE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02296___ykvE-RBAM_013430___ykvE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02296___ykvE
# 2: RBAM_013430___ykvE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:     132/148 (89.2%)
# Similarity:   138/148 (93.2%)
# Gaps:           3/148 ( 2.0%)
# Score: 671.0
# 
#
#=======================================

BSNT_02296___      1 ---MTEKSLKLFIVLSRAYRSINDHMNKHIHKHGLNPTEFAVLELLYHKG     47
                        .||.|||||||||||||||||||||||||||||||||||||||||||
RBAM_013430__      1 MTDKTENSLKLFIVLSRAYRSINDHMNKHIHKHGLNPTEFAVLELLYHKG     50

BSNT_02296___     48 DQPLQQIGDKILLASGSITYVVDKLEQKELLIRKASPTDRRVTFAQITEK     97
                     :|||||||||||||||||||||||||:||||||||||||||||||||:||
RBAM_013430__     51 NQPLQQIGDKILLASGSITYVVDKLEKKELLIRKASPTDRRVTFAQISEK    100

BSNT_02296___     98 GIGLLNDIFPDHAAEIDEMISVLSEEEVEMCTEMLKRVGLNAKQFHNK    145
                     ||.||:|||||||.||.|||||||:||:|||||||||||||||.||.|
RBAM_013430__    101 GIRLLDDIFPDHADEIKEMISVLSDEEIEMCTEMLKRVGLNAKHFHQK    148


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