Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02296 and RBAM_013430
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence dna-align/BSNT_02296___ykvE.1.9828.seq
# -bsequence dna-align/RBAM_013430___ykvE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02296___ykvE-RBAM_013430___ykvE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02296___ykvE-RBAM_013430___ykvE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02296___ykvE
# 2: RBAM_013430___ykvE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity: 356/447 (79.6%)
# Similarity: 356/447 (79.6%)
# Gaps: 9/447 ( 2.0%)
# Score: 1438.0
#
#
#=======================================
BSNT_02296___ 1 ATG---------ACAGAAAAATCACTGAAGTTATTTATCGTGCTGTCGCG 41
||| ||||||||.|||.||||.||||||||.||.|||||.||
RBAM_013430__ 1 ATGACGGATAAAACAGAAAACTCATTGAAATTATTTATTGTACTGTCACG 50
BSNT_02296___ 42 CGCGTATCGGTCTATTAACGATCATATGAATAAGCATATTCATAAGCATG 91
.|||||.||.|||||||||||.|||||||||||.||||||||||||||.|
RBAM_013430__ 51 TGCGTACCGATCTATTAACGACCATATGAATAAACATATTCATAAGCACG 100
BSNT_02296___ 92 GGCTGAATCCGACTGAATTTGCTGTGCTAGAGCTTTTGTACCATAAAGGC 141
|.|||||.|||||.||||||||.|||||.|||||..|||||||.||||||
RBAM_013430__ 101 GCCTGAACCCGACGGAATTTGCGGTGCTTGAGCTGCTGTACCACAAAGGC 150
BSNT_02296___ 142 GATCAGCCGCTACAGCAGATAGGAGATAAAATTCTCTTGGCTAGCGGGAG 191
.|.||||||||.||||||||.||.||.||||||.|.||.||.|||||.||
RBAM_013430__ 151 AACCAGCCGCTTCAGCAGATCGGCGACAAAATTTTATTAGCGAGCGGAAG 200
BSNT_02296___ 192 CATCACATACGTTGTAGATAAGCTGGAGCAAAAAGAACTTCTCATTCGGA 241
.||.|||||||||||.||.||..|.|||.||||||||||||||||..|.|
RBAM_013430__ 201 TATTACATACGTTGTTGACAAATTAGAGAAAAAAGAACTTCTCATCAGAA 250
BSNT_02296___ 242 AAGCGTCTCCTACAGACAGACGAGTGACATTTGCGCAAATTACTGAAAAA 291
||||.||.||.||.||||||.|||||||.||.||.||.|||.|.|||||.
RBAM_013430__ 251 AAGCCTCGCCGACTGACAGAAGAGTGACTTTCGCACAGATTTCCGAAAAG 300
BSNT_02296___ 292 GGCATCGGTCTTTTGAATGATATTTTCCCTGATCACGCTGCTGAAATTGA 341
||.|||.||||||||.|.|||||||||||||||||.||||..||||||.|
RBAM_013430__ 301 GGAATCCGTCTTTTGGACGATATTTTCCCTGATCATGCTGACGAAATTAA 350
BSNT_02296___ 342 TGAAATGATCAGCGTATTAAGCGAAGAAGAGGTAGAGATGTGCACCGAAA 391
.|||||||||||.||..|.||.||.||||||.||||.|||||.||.||||
RBAM_013430__ 351 AGAAATGATCAGTGTGCTGAGTGATGAAGAGATAGAAATGTGTACGGAAA 400
BSNT_02296___ 392 TGTTAAAAAGAGTAGGATTAAACGCAAAACAGTTTCATAATAAGTAA 438
||.|.||||||||.||.||||||||.|||||.||||||.|.||.|||
RBAM_013430__ 401 TGCTGAAAAGAGTGGGGTTAAACGCTAAACATTTTCATCAGAAATAA 447
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