Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02294 and RBAM_013420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence pep-align/BSNT_02294___kinD.1.9828.seq
# -bsequence pep-align/RBAM_013420___kinD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02294___kinD-RBAM_013420___kinD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02294___kinD-RBAM_013420___kinD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02294___kinD
# 2: RBAM_013420___kinD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 500
# Identity: 378/500 (75.6%)
# Similarity: 444/500 (88.8%)
# Gaps: 1/500 ( 0.2%)
# Score: 1944.0
#
#
#=======================================
BSNT_02294___ 1 MKILKGACGRVKLYIILVVIPAIVISFFVYEKEKDTIAAEHKQEASVLLN 50
|...|||.|::|||:|||:|||::||||:|||||..||.:|.||||::||
RBAM_013420__ 1 MNTFKGARGKIKLYLILVIIPALIISFFIYEKEKQKIADKHIQEASMMLN 50
BSNT_02294___ 51 LHRNKINYLIGETMARMTSLSIAIDRPVDIKKMQSILEKTFDSEPRFSGL 100
|||||:|||||||.||||:|:||:|:||:.:|:..||::.|:.|||||||
RBAM_013420__ 51 LHRNKLNYLIGETKARMTTLAIAVDKPVNEEKIIDILDQAFEDEPRFSGL 100
BSNT_02294___ 101 YFLNAKGDVTASTTELKTKVNLADRSFFTKAKETKKTVISDSYSSRITGQ 150
|.||:||||.||||:||:|||||||.:|||||:||||||::.||||||||
RBAM_013420__ 101 YMLNSKGDVIASTTDLKSKVNLADRPYFTKAKKTKKTVITNDYSSRITGQ 150
BSNT_02294___ 151 PIFTICVPVSDSKRNVTDYLVAAIQIDYLKNLINLLSPDVYIEVVNQDGK 200
.||||||||.|:||.||||||||||:|||:|:||:||||||::..||: |
RBAM_013420__ 151 RIFTICVPVLDAKREVTDYLVAAIQVDYLRNMINMLSPDVYVKATNQN-K 199
BSNT_02294___ 201 MIFASGQASHAEDQKPVSGYLDDISWNMKVYPNPVTIEELTKSLVLPLSC 250
:|||||:|..:|..||||||||||:||:.|||.||.:.|||||::||:|.
RBAM_013420__ 200 VIFASGRADQSEGVKPVSGYLDDINWNINVYPKPVELNELTKSVLLPMSS 249
BSNT_02294___ 251 IIVLLNILFILVLYYLLKRQTQLERSENEAQKLELIGTLAASTAHEIRNP 300
|.||||||||||.||||||:|||||::|||||||||||||||||||||||
RBAM_013420__ 250 IAVLLNILFILVQYYLLKRKTQLERAQNEAQKLELIGTLAASTAHEIRNP 299
BSNT_02294___ 301 LTGISGFIQLLQKKYKGEEDQLYFSIIEQEIKRINQIVSEFLVLGKPTAE 350
||||||||||||||||.|||||||||||||||||||||||||||||||||
RBAM_013420__ 300 LTGISGFIQLLQKKYKSEEDQLYFSIIEQEIKRINQIVSEFLVLGKPTAE 349
BSNT_02294___ 351 KWELNSLQDIIGEIMPIIYSEGNLYNVEVELQYLTEQPLLVKCTKDHIKQ 400
:.|:||||||:.|||||||||||||||||.::.|..:||.|.||||||||
RBAM_013420__ 350 RLEVNSLQDILDEIMPIIYSEGNLYNVEVNVEILVNRPLKVNCTKDHIKQ 399
BSNT_02294___ 401 VILNVAKNGLESMPEGGKLTISLGALDKKAIIKVVDNGEGISQEMLDHIF 450
||||||||.||||.|||:|:|.|.|.|.||:|||.|||.|||::||:|||
RBAM_013420__ 400 VILNVAKNALESMQEGGRLSIYLEARDHKAVIKVADNGMGISEDMLEHIF 449
BSNT_02294___ 451 LPFVTSKEKGTGLGLVVCKRIVLMYGGSIHIESEVRRGTKVTITLPVSAS 500
|||||||||||||||||||||:|||||||.|:|||.:||:||||||.::.
RBAM_013420__ 450 LPFVTSKEKGTGLGLVVCKRIMLMYGGSIDIQSEVDKGTEVTITLPAASR 499
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