Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02294 and RBAM_013420
See
Amino acid alignment /
Visit
BSNT_02294 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence dna-align/BSNT_02294___kinD.1.9828.seq
# -bsequence dna-align/RBAM_013420___kinD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02294___kinD-RBAM_013420___kinD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02294___kinD-RBAM_013420___kinD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02294___kinD
# 2: RBAM_013420___kinD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1542
# Identity: 1126/1542 (73.0%)
# Similarity: 1126/1542 (73.0%)
# Gaps: 81/1542 ( 5.3%)
# Score: 3938.0
#
#
#=======================================
BSNT_02294___ 1 TTGAAAATACTAAAAGGCGCCTGCGGGAGAG-TCAAACTTTATATCATAC 49
.||||.|.|.|.|||||.|||.| ||||.|| ||||.||||||.|||||.
RBAM_013420__ 1 GTGAATACATTTAAAGGTGCCCG-GGGAAAGATCAAGCTTTATCTCATAT 49
BSNT_02294___ 50 TGGTCGTGATTCCGGCAATCGTCATCAGCTTTTTCGTATATGAAAAAGAA 99
||||..|.||.||||||.|..|.||||||||||||.|.||||||||||||
RBAM_013420__ 50 TGGTGATCATCCCGGCACTTATTATCAGCTTTTTCATTTATGAAAAAGAA 99
BSNT_02294___ 100 AAAGATACAATAGCTGCAGAACATAAACAAGAAGCAAGTGTCCTGCTAAA 149
||..|.|.||||||.|...||||.|.|||.|||||.|||.|..||||.||
RBAM_013420__ 100 AAGCAGAAAATAGCCGATAAACACATACAGGAAGCCAGTATGATGCTCAA 149
BSNT_02294___ 150 CCTTCACCGCAACAAAATCAATTATTTAATCGGAGAAACAATGGCGAGAA 199
||||||||||||.||..||||||||||||||||.|||||||..||..|.|
RBAM_013420__ 150 CCTTCACCGCAATAAGCTCAATTATTTAATCGGTGAAACAAAAGCCCGGA 199
BSNT_02294___ 200 TGACCTC-CTTGTCCATCGCCATCGACAGACCGGTTGATATAAAGAAAAT 248
||||..| |||| |.|||||..||||.|..||.|| ..||.|||||||
RBAM_013420__ 200 TGACAACACTTG-CGATCGCTGTCGATAAGCCTGT--CAATGAAGAAAA- 245
BSNT_02294___ 249 G--CAGTCA-ATTTTGGAAAAGACCTTTGATTCAGAGCCGAGATTTTCCG 295
| ||.|.| |||.|.||..||.|.|||||....||.||.|||||...||
RBAM_013420__ 246 GATCATTGACATTCTCGATCAGGCTTTTGAGGATGAACCCAGATTCAGCG 295
BSNT_02294___ 296 GTCTCTATTTTCTCAATGCCAAAGGAGACGTCACCGCAAGCACAACCGAA 345
||||.|||.|.||.|||.|||||||.||.||||.|||||||||.||.||.
RBAM_013420__ 296 GTCTGTATATGCTGAATTCCAAAGGTGATGTCATCGCAAGCACGACTGAT 345
BSNT_02294___ 346 TTAAAAACGAAAGTAAACCTGGCCGACAGATCTTTTTTTACAAAAGCAAA 395
.|.|||.|.||.||.||..|||||||||||.|.|.||||||.||.||.||
RBAM_013420__ 346 CTGAAATCAAAGGTGAATTTGGCCGACAGACCGTATTTTACGAAGGCGAA 395
BSNT_02294___ 396 GGAAACTAAAAAGACAGTCATTTCAGATAGTTATTCGAGCAGAATTACTG 445
..|.||.|||||.||.|||||..||.||...||.||.|||||||||||.|
RBAM_013420__ 396 AAAGACGAAAAAAACGGTCATCACAAATGACTACTCCAGCAGAATTACAG 445
BSNT_02294___ 446 GTCAGCCAATTTTCACAATTTGTGTCCCTGTTTCGGACTCAAAACGTAAT 495
|.||||..||.|||||.||.||.||.||.||.|..|||.|||||||..|.
RBAM_013420__ 446 GCCAGCGCATCTTCACGATCTGCGTGCCGGTGTTAGACGCAAAACGGGAA 495
BSNT_02294___ 496 GTGACAGATTATCTTGTCGCAGCTATTCAAATTGATTATTTGAAAAATCT 545
||.||.||||||.|.||.||.||.||.|||.|.||||||||||.||||.|
RBAM_013420__ 496 GTCACGGATTATTTAGTAGCCGCCATACAAGTCGATTATTTGAGAAATAT 545
BSNT_02294___ 546 CATTAACTTGCTGAGCCCTGATGTTTATATTGAAGTTGTG-AACCA---A 591
.||.||..|||||||||||||.|||||| .|.||| | ||||| |
RBAM_013420__ 546 GATCAATATGCTGAGCCCTGACGTTTAT-GTCAAG----GCAACCAATCA 590
BSNT_02294___ 592 GACGGGAAAATGATTTTTGCGAGCGGACAAGCCTCTCATGCAGAGGATCA 641
|| ..|||.||||.|||||.|||||||..||...|||..||||.|.|..
RBAM_013420__ 591 GA--ATAAAGTGATATTTGCCAGCGGACGGGCTGATCAATCAGAAGGTGT 638
BSNT_02294___ 642 GAAACCTGTCAGCGGATATCTGGATGATATCAGCTGGAATATGAAAGTCT 691
||||||.||||||||.||||||||||||||.|..||||||||.||.||.|
RBAM_013420__ 639 GAAACCGGTCAGCGGCTATCTGGATGATATTAATTGGAATATCAATGTTT 688
BSNT_02294___ 692 ATCCGAACCCGGT----CACAATAGAAGAACTGACGAAAAGCCTAGTGCT 737
|||||||.||||| |..||| ||.|||||.||||||.|..||||
RBAM_013420__ 689 ATCCGAAACCGGTTGAGCTGAAT----GAGCTGACCAAAAGCGTGCTGCT 734
BSNT_02294___ 738 TCCGCTTTCATGTATTATTGTTCTGCTGAATATCCTTTTTATTCTCGTGC 787
.|||.|.||..|||||...||.|||||||||||.||.||.||.|||||.|
RBAM_013420__ 735 GCCGATGTCCAGTATTGCCGTGCTGCTGAATATTCTGTTCATCCTCGTTC 784
BSNT_02294___ 788 TGTATTATTTGCTGAAGCGGCAGACCCAGCTGGAGCGCTCAGAAAACGAG 837
..||||||.||||.|||||..|||||||||||||||||.|..||||.||.
RBAM_013420__ 785 AATATTATCTGCTTAAGCGCAAGACCCAGCTGGAGCGCGCTCAAAATGAA 834
BSNT_02294___ 838 GCGCAAAAATTAGAACTGATCGGGACGCTTGCTGCCAGCACAGCCCATGA 887
|||||.|||||.||.||||||||.||||||||.||||||||.||||||||
RBAM_013420__ 835 GCGCAGAAATTGGAGCTGATCGGAACGCTTGCCGCCAGCACCGCCCATGA 884
BSNT_02294___ 888 AATCCGTAACCCTCTTACCGGCATAAGCGGCTTTATTCAGCTGTTGCAAA 937
||||||.|||||.|||||.||.||.||||||||.||||||||.|||||.|
RBAM_013420__ 885 AATCCGCAACCCGCTTACAGGGATCAGCGGCTTCATTCAGCTTTTGCAGA 934
BSNT_02294___ 938 AGAAATATAAAGGTGAAGAGGATCAGCTTTACTTCTCCATTATCGAACAG 987
|.|||||.|||...||.||.||||||||.||.|||||.|||||.||.|||
RBAM_013420__ 935 AAAAATACAAATCGGAGGAAGATCAGCTGTATTTCTCAATTATTGAGCAG 984
BSNT_02294___ 988 GAGATAAAGCGCATCAATCAAATAGTGAGTGAGTTTCTCGTTCTCGGCAA 1037
|||||.||.||.||||||||.||.||.|||||||||.|.||.||.||.||
RBAM_013420__ 985 GAGATTAAACGGATCAATCAGATTGTCAGTGAGTTTTTAGTGCTTGGAAA 1034
BSNT_02294___ 1038 GCCGACAGCTGAAAAATGGGAGCTGAACTCACTTCAGGACATTATCGGAG 1087
.||.||.||||||...|.|||..|||||||.||.|||||.|||.|.|..|
RBAM_013420__ 1035 ACCCACTGCTGAACGGTTGGAAGTGAACTCGCTGCAGGATATTCTTGATG 1084
BSNT_02294___ 1088 AAATTATGCCGATCATTTATTCTGAGGGCAATCTATACAATGTTGAAGTC 1137
|.|||||||||||.|||||||||||.||.||||||||||||||.|||||
RBAM_013420__ 1085 AGATTATGCCGATTATTTATTCTGAAGGGAATCTATACAATGTGGAAGT- 1133
BSNT_02294___ 1138 GAAT-TGCAGTAT-----TTAACCGAGCAGCCCTTACTC---GTAAAATG 1178
|||| ||.|| || |.||.|| ||| .||| ||.||.||
RBAM_013420__ 1134 GAATGTGGAG-ATTCTCGTCAATCG----GCC---GCTCAAGGTCAACTG 1175
BSNT_02294___ 1179 TACAAAAGATCATATTAAACAAGTGATTTTAAATGTAGCAAAAAATGGCC 1228
.||.|||||.|||||||||||.||||||||||||||.||.|||||.|..|
RBAM_013420__ 1176 CACGAAAGACCATATTAAACAGGTGATTTTAAATGTCGCGAAAAACGCGC 1225
BSNT_02294___ 1229 TCGAGTCAATGCCTGAAGGAGGCAAACT----AACGATTT-----CCCTG 1269
|.||.||.||||..|||||.|||...|| |.|.|||| |||
RBAM_013420__ 1226 TGGAATCCATGCAGGAAGGCGGCCGGCTGTCCATCTATTTAGAAGCCC-- 1273
BSNT_02294___ 1270 GGAGCTTTAGATAAAAAAGCCATAATCAAAGTTGTGGATAACGGTGAA-- 1317
|| |||.|.|||||..|.||.||.||.|..||.|||| |||
RBAM_013420__ 1274 ---GC----GATCATAAAGCAGTCATTAAGGTGGCCGACAACG--GAATG 1314
BSNT_02294___ 1318 GGGATTTCTCAGGAAATGCTGGATCACATCTTCCTTCCCTTTGTTACTTC 1367
||.||||||.|.||.|||||.||.|||||.||.|||||.|||||.||.||
RBAM_013420__ 1315 GGCATTTCTGAAGATATGCTTGAGCACATTTTTCTTCCGTTTGTAACGTC 1364
BSNT_02294___ 1368 TAAAGAAAAAGGAACCGGGCTCGGCCTTGTTGTTTGTAAACGGATCGTGC 1417
.||.||||||||.|||||.|||||||||||.||.||||||||.|||.|||
RBAM_013420__ 1365 AAAGGAAAAAGGCACCGGCCTCGGCCTTGTCGTATGTAAACGAATCATGC 1414
BSNT_02294___ 1418 TGATGTACGGAGGCTCTATTCATATTGAAAGTGAAGTGCG--AAGAGGCA 1465
||||||||||.||.||.|||.|.|||.||||.||||| || ||| ||||
RBAM_013420__ 1415 TGATGTACGGCGGTTCGATTGACATTCAAAGCGAAGT-CGATAAG-GGCA 1462
BSNT_02294___ 1466 CAAAGGTGACAATCACCCTCCCCGTATCCGCATCATAG---- 1503
||.||||.||.||.||||||||.| ||||.|| |.|
RBAM_013420__ 1463 CAGAGGTCACCATTACCCTCCCTG---CCGCTTC-TCGATGA 1500
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.