Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02292 and RBAM_013410

See DNA alignment / Visit BSNT_02292 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence pep-align/BSNT_02292___spo0E.1.9828.seq
#    -bsequence pep-align/RBAM_013410___spo0E.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02292___spo0E-RBAM_013410___spo0E.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02292___spo0E-RBAM_013410___spo0E.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02292___spo0E
# 2: RBAM_013410___spo0E
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 86
# Identity:      63/86 (73.3%)
# Similarity:    75/86 (87.2%)
# Gaps:           1/86 ( 1.2%)
# Score: 325.0
# 
#
#=======================================

BSNT_02292___      1 MGGSSEQERLLVSIDEKRKLMIDAARKQGFTGHDTIRHSQELDCLINEYH     50
                     ||..||||:||||||:|||:|||||.:|||||:||||||||||||:|.|.
RBAM_013410__      1 MGSYSEQEKLLVSIDKKRKMMIDAANRQGFTGYDTIRHSQELDCLMNAYQ     50

BSNT_02292___     51 QLM-QENEHSQGIQGLVKKLGLWPRRDVMPAYDANK     85
                     ||: ::..|.|||||||||:||:.|.||||||:|||
RBAM_013410__     51 QLVNRDRTHHQGIQGLVKKIGLFSRGDVMPAYEANK     86


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