Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02288 and RBAM_013380

See DNA alignment / Visit BSNT_02288 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:58
# Commandline: needle
#    -asequence pep-align/BSNT_02288___mtnX.1.9828.seq
#    -bsequence pep-align/RBAM_013380___mtnX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02288___mtnX-RBAM_013380___mtnX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02288___mtnX-RBAM_013380___mtnX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02288___mtnX
# 2: RBAM_013380___mtnX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 235
# Identity:     165/235 (70.2%)
# Similarity:   206/235 (87.7%)
# Gaps:           1/235 ( 0.4%)
# Score: 960.0
# 
#
#=======================================

BSNT_02288___      1 MTTRKPFIICDFDGTITMNDNIINIMKTFAPPEWVALKDGVLSKTLSIKE     50
                      .||.|.||||||||:||||||:::||.||||||:.||||||||::||:|
RBAM_013380__      1 -MTRTPLIICDFDGTVTMNDNIVSMMKEFAPPEWLELKDGVLSKSISIQE     49

BSNT_02288___     51 GVGRMFGLLPSRLKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISG    100
                     |||||||||||.||||:|.|:|:|||||:||.:||:|:..:.:|||::||
RBAM_013380__     50 GVGRMFGLLPSSLKEELTGFILKDAKIRDGFLDFVSFVRSNGLPFYIVSG     99

BSNT_02288___    101 GMDFFVYPLLEGIVDKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCC    150
                     ||||||:|||||||:|:||:||||||||::|||||||:|.|.|:||||||
RBAM_013380__    100 GMDFFVHPLLEGIVEKERIFCNHASFDNEHIHIDWPHACDGDCTNQCGCC    149

BSNT_02288___    151 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLN    200
                     |||||.:||:..:::|||||||||||||||||:||||||||.||:|..|.
RBAM_013380__    150 KPSVIRKLSDQQKFLIMIGDSVTDVEAAKLSDMCFARDYLLTECKELGLR    199

BSNT_02288___    201 HLPYQDFYEIRKEIENVKEVQEWLQNKNAGESSLK    235
                     |||:|||:|::..|||:.|||.|||.||||.:..:
RBAM_013380__    200 HLPFQDFHEVKTGIENIGEVQAWLQKKNAGANLPR    234


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