Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02288 and RBAM_013380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence dna-align/BSNT_02288___mtnX.1.9828.seq
# -bsequence dna-align/RBAM_013380___mtnX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02288___mtnX-RBAM_013380___mtnX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02288___mtnX-RBAM_013380___mtnX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02288___mtnX
# 2: RBAM_013380___mtnX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 727
# Identity: 532/727 (73.2%)
# Similarity: 532/727 (73.2%)
# Gaps: 41/727 ( 5.6%)
# Score: 1911.0
#
#
#=======================================
BSNT_02288___ 1 ATGACGACTCGAAAACCTTTTATTATTTGTGATTTTGACGGAACAATCAC 50
|.|||.||.|.|||..|.||||||||||||||.||||||||..||||
RBAM_013380__ 1 ---ATGACCCGCACACCGCTGATTATTTGTGATTTCGACGGAACGGTCAC 47
BSNT_02288___ 51 GATGAACGACAACATTATAAATATCATGAAAACATTTGCTCCCCCAGAGT 100
.|||||||||||||||.|.|..||.||||||..|||.||.||.||.||||
RBAM_013380__ 48 CATGAACGACAACATTGTCAGCATGATGAAAGAATTCGCGCCTCCTGAGT 97
BSNT_02288___ 101 GGGTGGCATTAAAAGACGGCGTACTTTCCAAAACGC-TGTCGATCAAGGA 149
||.|.|.||||||||||||.||.||.||.|||| || |.||.|||.|.||
RBAM_013380__ 98 GGCTTGAATTAAAAGACGGTGTTCTGTCTAAAA-GCATATCAATCCAAGA 146
BSNT_02288___ 150 AGGTGTCGGGCGGATGTTCGGCCTTCTGCCCAGCCGTTTAAAAGAAGAGA 199
|||.|||||.|||||||||||.||.|||||.|||.|.|||||||||||..
RBAM_013380__ 147 AGGAGTCGGCCGGATGTTCGGACTGCTGCCGAGCAGCTTAAAAGAAGAAC 196
BSNT_02288___ 200 TTACAAGTTTTGTATTGGAAGATGCAAAAATCAGGGAAGGCTTTCGGGAA 249
|.||..|.|||.|..||.|.|||||.|||||..||||.||||||..|||.
RBAM_013380__ 197 TGACCGGCTTTATCCTGAAGGATGCGAAAATACGGGACGGCTTTTTGGAT 246
BSNT_02288___ 250 TTTGTAGCATTT-----ATCAATGAGCACGAGATTCCGTTTTATGTCATA 294
|||||..|.||| .|||| |||...|.|||||||||.||.||
RBAM_013380__ 247 TTTGTCTCGTTTGTCCGGTCAA-----ACGGCCTCCCGTTTTATATCGTA 291
BSNT_02288___ 295 AGCGGTGGAATGGACTTTTTTGTATATCCTTTGCTT---GAAGGCATTGT 341
|||||.|||||||||||||||||..|||| |||| |||||.||.||
RBAM_013380__ 292 AGCGGGGGAATGGACTTTTTTGTGCATCC---GCTTTTGGAAGGGATCGT 338
BSNT_02288___ 342 GGATAAAGACCGCATTTATTGCAACCATGCTTCATTTGACAATGACTATA 391
.||.||.||.||.||||..|||||.|||||.||.|||||||||||..|||
RBAM_013380__ 339 AGAAAAGGAGCGGATTTTCTGCAATCATGCATCCTTTGACAATGAGCATA 388
BSNT_02288___ 392 TCCATATTGACTGGCCTCATTCCTGCAAGGGCACA-TGCAGCAATCAATG 440
|.|||||.||||||||.||..||||..|.|| |.| ||.|.|||||||||
RBAM_013380__ 389 TTCATATAGACTGGCCGCACGCCTGTGACGG-AGACTGTACCAATCAATG 437
BSNT_02288___ 441 CGGGTGCTGTAAGCCGTCGGTCATCCATGAACTTTCTGAACCGAACCAAT 490
|||.|||||.||.|||||.|||||||.|.|.||.||.||.|.|.|..|||
RBAM_013380__ 438 CGGCTGCTGCAAACCGTCAGTCATCCGTAAGCTATCCGATCAGCAGAAAT 487
BSNT_02288___ 491 ATATCATCATGATCGGTGATTCGGTTACAGATGTGGAGGCAGCAAAGCTG 540
.|.||||.|||||||||||||||||.||.|||||.|||||.||||||.||
RBAM_013380__ 488 TTCTCATTATGATCGGTGATTCGGTCACGGATGTCGAGGCTGCAAAGTTG 537
BSNT_02288___ 541 TCTGACCTATGCTTTGCAAGGGATTATTTATTAAACGAATGCCGGGAGCA 590
||.||..|.||||||||.||.||||||.|.||.|..||||||
RBAM_013380__ 538 TCCGATATGTGCTTTGCGAGAGATTATCTTTTGACTGAATGC-------- 579
BSNT_02288___ 591 AAA--------CCTCAATCATCTTCCGTATCAAGATTTTTATGAGATCAG 632
||| ||||...|||||.||.|.||||||||||.|||||.|.|.
RBAM_013380__ 580 AAAGAACTCGGCCTCCGGCATCTGCCTTTTCAAGATTTTCATGAGGTGAA 629
BSNT_02288___ 633 AA-AGGAAATTGAGAATGTAAAGGAGGTACAGGAATGGCTGCAAAACAAG 681
|| ||| .|||||.||..|...||||||.||||.||||||||||||.|||
RBAM_013380__ 630 AACAGG-CATTGAAAACATCGGGGAGGTGCAGGCATGGCTGCAAAAGAAG 678
BSNT_02288___ 682 AACGCTGGCGAGAGCTCGCTGAAGTAA 708
||||||||||.||.||.||.||.||||
RBAM_013380__ 679 AACGCTGGCGCGAACTTGCCGAGGTAA 705
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