Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02285 and RBAM_013350

See DNA alignment / Visit BSNT_02285 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:58
# Commandline: needle
#    -asequence pep-align/BSNT_02285___ykrU.1.9828.seq
#    -bsequence pep-align/RBAM_013350___ykrU.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02285___ykrU-RBAM_013350___ykrU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02285___ykrU-RBAM_013350___ykrU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02285___ykrU
# 2: RBAM_013350___ykrU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity:     202/259 (78.0%)
# Similarity:   230/259 (88.8%)
# Gaps:           0/259 ( 0.0%)
# Score: 1113.0
# 
#
#=======================================

BSNT_02285___      1 MKWTISCLQFDISYGKTSENIKKAEFFIEKESKHADVLVLPELWTTGYDL     50
                     ||||:||||||||||..|||.||||..||:||:||||:||||||||||||
RBAM_013350__      1 MKWTVSCLQFDISYGNPSENFKKAESLIEQESRHADVIVLPELWTTGYDL     50

BSNT_02285___     51 ANLDELADKDGRSAQSWLKKTAKKHGVHIVAGSVAVRKNSDVYNTMYIAD    100
                     ..||:|||::|:.::.|||:|||.:.||:||||.||::..:|||||||||
RBAM_013350__     51 TRLDQLADENGKVSEQWLKETAKTYNVHLVAGSFAVKEGENVYNTMYIAD    100

BSNT_02285___    101 KEGQIIKEYRKAHLFQLMDEHLYLSAGSEDGYFELDGVKSSGLICYDIRF    150
                     ..|||:|.|:|||||||||||||||||:.||.|||||||.:|||||||||
RBAM_013350__    101 NSGQIVKRYQKAHLFQLMDEHLYLSAGNSDGSFELDGVKCAGLICYDIRF    150

BSNT_02285___    151 PEWIRKHTTKGANVLFISAEWPLPRLDHWKSLLIARAIENQCFVAACNCT    200
                     ||||||||::|||||||||||||||||||:||||||||||||||||.|||
RBAM_013350__    151 PEWIRKHTSQGANVLFISAEWPLPRLDHWRSLLIARAIENQCFVAASNCT    200

BSNT_02285___    201 GSNPDNEFAGHSLIIDPWGRVLAEGGREEGIVRAEIDLQESAEVRESIPV    250
                     ||||||||||||||||||||:|||..|.||.||||||:.|||.||.:|||
RBAM_013350__    201 GSNPDNEFAGHSLIIDPWGRILAERDRTEGAVRAEIDVSESAAVRGTIPV    250

BSNT_02285___    251 FNDIRKDLY    259
                     |.|:|:|||
RBAM_013350__    251 FQDLRRDLY    259


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.